Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9113 | 27562;27563;27564 | chr2:178712585;178712584;178712583 | chr2:179577312;179577311;179577310 |
N2AB | 8796 | 26611;26612;26613 | chr2:178712585;178712584;178712583 | chr2:179577312;179577311;179577310 |
N2A | 7869 | 23830;23831;23832 | chr2:178712585;178712584;178712583 | chr2:179577312;179577311;179577310 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | rs775352248 | 0.378 | None | N | 0.259 | 0.23 | 0.510758216515 | gnomAD-2.1.1 | 8.11E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.12423E-04 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1658 | likely_benign | 0.1801 | benign | -0.352 | Destabilizing | None | N | 0.101 | neutral | None | None | None | None | N |
K/C | 0.4835 | ambiguous | 0.4708 | ambiguous | -0.447 | Destabilizing | 0.935 | D | 0.303 | neutral | None | None | None | None | N |
K/D | 0.4186 | ambiguous | 0.453 | ambiguous | 0.258 | Stabilizing | 0.149 | N | 0.331 | neutral | None | None | None | None | N |
K/E | 0.1042 | likely_benign | 0.1126 | benign | 0.323 | Stabilizing | 0.062 | N | 0.173 | neutral | N | 0.496733385 | None | None | N |
K/F | 0.4819 | ambiguous | 0.5046 | ambiguous | -0.305 | Destabilizing | 0.38 | N | 0.333 | neutral | None | None | None | None | N |
K/G | 0.3162 | likely_benign | 0.3126 | benign | -0.641 | Destabilizing | 0.081 | N | 0.274 | neutral | None | None | None | None | N |
K/H | 0.1792 | likely_benign | 0.1843 | benign | -0.93 | Destabilizing | 0.555 | D | 0.252 | neutral | None | None | None | None | N |
K/I | 0.1493 | likely_benign | 0.1775 | benign | 0.359 | Stabilizing | None | N | 0.259 | neutral | N | 0.506941044 | None | None | N |
K/L | 0.192 | likely_benign | 0.1995 | benign | 0.359 | Stabilizing | 0.012 | N | 0.232 | neutral | None | None | None | None | N |
K/M | 0.1334 | likely_benign | 0.1477 | benign | 0.18 | Stabilizing | 0.38 | N | 0.251 | neutral | None | None | None | None | N |
K/N | 0.2259 | likely_benign | 0.2502 | benign | -0.053 | Destabilizing | 0.117 | N | 0.26 | neutral | N | 0.494659686 | None | None | N |
K/P | 0.8689 | likely_pathogenic | 0.8517 | pathogenic | 0.153 | Stabilizing | 0.555 | D | 0.313 | neutral | None | None | None | None | N |
K/Q | 0.0871 | likely_benign | 0.0889 | benign | -0.176 | Destabilizing | 0.117 | N | 0.269 | neutral | D | 0.525978856 | None | None | N |
K/R | 0.0705 | likely_benign | 0.068 | benign | -0.24 | Destabilizing | None | N | 0.074 | neutral | N | 0.48297744 | None | None | N |
K/S | 0.1987 | likely_benign | 0.2186 | benign | -0.711 | Destabilizing | 0.035 | N | 0.157 | neutral | None | None | None | None | N |
K/T | 0.0808 | likely_benign | 0.0918 | benign | -0.456 | Destabilizing | 0.117 | N | 0.281 | neutral | N | 0.482689439 | None | None | N |
K/V | 0.1341 | likely_benign | 0.1521 | benign | 0.153 | Stabilizing | 0.012 | N | 0.25 | neutral | None | None | None | None | N |
K/W | 0.619 | likely_pathogenic | 0.6219 | pathogenic | -0.202 | Destabilizing | 0.935 | D | 0.399 | neutral | None | None | None | None | N |
K/Y | 0.3967 | ambiguous | 0.411 | ambiguous | 0.116 | Stabilizing | 0.555 | D | 0.299 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.