Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9119 | 27580;27581;27582 | chr2:178712567;178712566;178712565 | chr2:179577294;179577293;179577292 |
N2AB | 8802 | 26629;26630;26631 | chr2:178712567;178712566;178712565 | chr2:179577294;179577293;179577292 |
N2A | 7875 | 23848;23849;23850 | chr2:178712567;178712566;178712565 | chr2:179577294;179577293;179577292 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs2154296108 | None | 0.028 | N | 0.096 | 0.126 | 0.126345400529 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/K | rs2154296108 | None | 0.028 | N | 0.096 | 0.126 | 0.126345400529 | gnomAD-4.0.0 | 6.56607E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47016E-05 | 0 | 0 |
N/S | None | None | 0.514 | N | 0.284 | 0.178 | 0.180583059064 | gnomAD-4.0.0 | 1.36946E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7999E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1526 | likely_benign | 0.1528 | benign | -0.289 | Destabilizing | 0.737 | D | 0.334 | neutral | None | None | None | None | N |
N/C | 0.2751 | likely_benign | 0.2484 | benign | 0.18 | Stabilizing | 0.998 | D | 0.425 | neutral | None | None | None | None | N |
N/D | 0.1406 | likely_benign | 0.1375 | benign | 0.242 | Stabilizing | 0.837 | D | 0.227 | neutral | N | 0.50583287 | None | None | N |
N/E | 0.2794 | likely_benign | 0.2794 | benign | 0.223 | Stabilizing | 0.584 | D | 0.26 | neutral | None | None | None | None | N |
N/F | 0.4052 | ambiguous | 0.3959 | ambiguous | -0.714 | Destabilizing | 0.993 | D | 0.446 | neutral | None | None | None | None | N |
N/G | 0.1982 | likely_benign | 0.1912 | benign | -0.455 | Destabilizing | 0.85 | D | 0.225 | neutral | None | None | None | None | N |
N/H | 0.0944 | likely_benign | 0.0877 | benign | -0.372 | Destabilizing | 0.973 | D | 0.344 | neutral | N | 0.506526304 | None | None | N |
N/I | 0.1624 | likely_benign | 0.1654 | benign | 0.06 | Stabilizing | 0.947 | D | 0.448 | neutral | N | 0.487111588 | None | None | N |
N/K | 0.1912 | likely_benign | 0.1869 | benign | 0.153 | Stabilizing | 0.028 | N | 0.096 | neutral | N | 0.419480535 | None | None | N |
N/L | 0.1745 | likely_benign | 0.1704 | benign | 0.06 | Stabilizing | 0.872 | D | 0.39 | neutral | None | None | None | None | N |
N/M | 0.2404 | likely_benign | 0.2393 | benign | 0.12 | Stabilizing | 0.993 | D | 0.416 | neutral | None | None | None | None | N |
N/P | 0.4155 | ambiguous | 0.3912 | ambiguous | -0.03 | Destabilizing | 0.993 | D | 0.426 | neutral | None | None | None | None | N |
N/Q | 0.2269 | likely_benign | 0.2203 | benign | -0.275 | Destabilizing | 0.209 | N | 0.177 | neutral | None | None | None | None | N |
N/R | 0.2219 | likely_benign | 0.2067 | benign | 0.214 | Stabilizing | 0.021 | N | 0.1 | neutral | None | None | None | None | N |
N/S | 0.068 | likely_benign | 0.0693 | benign | -0.134 | Destabilizing | 0.514 | D | 0.284 | neutral | N | 0.398761333 | None | None | N |
N/T | 0.0881 | likely_benign | 0.0926 | benign | -0.004 | Destabilizing | 0.064 | N | 0.111 | neutral | N | 0.442264181 | None | None | N |
N/V | 0.1793 | likely_benign | 0.1807 | benign | -0.03 | Destabilizing | 0.872 | D | 0.41 | neutral | None | None | None | None | N |
N/W | 0.6584 | likely_pathogenic | 0.611 | pathogenic | -0.745 | Destabilizing | 0.998 | D | 0.459 | neutral | None | None | None | None | N |
N/Y | 0.1423 | likely_benign | 0.1313 | benign | -0.442 | Destabilizing | 0.991 | D | 0.435 | neutral | N | 0.487365078 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.