Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9120 | 27583;27584;27585 | chr2:178712564;178712563;178712562 | chr2:179577291;179577290;179577289 |
N2AB | 8803 | 26632;26633;26634 | chr2:178712564;178712563;178712562 | chr2:179577291;179577290;179577289 |
N2A | 7876 | 23851;23852;23853 | chr2:178712564;178712563;178712562 | chr2:179577291;179577290;179577289 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | None | None | 0.999 | N | 0.651 | 0.38 | 0.574978667741 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2868 | likely_benign | 0.2759 | benign | -0.344 | Destabilizing | 0.885 | D | 0.462 | neutral | N | 0.459570136 | None | None | N |
D/C | 0.8147 | likely_pathogenic | 0.7607 | pathogenic | -0.137 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
D/E | 0.3645 | ambiguous | 0.3236 | benign | -0.381 | Destabilizing | 0.939 | D | 0.392 | neutral | N | 0.502098266 | None | None | N |
D/F | 0.8249 | likely_pathogenic | 0.7845 | pathogenic | -0.032 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
D/G | 0.2285 | likely_benign | 0.2272 | benign | -0.605 | Destabilizing | 0.885 | D | 0.438 | neutral | N | 0.473786824 | None | None | N |
D/H | 0.4435 | ambiguous | 0.4017 | ambiguous | 0.056 | Stabilizing | 0.998 | D | 0.597 | neutral | N | 0.489626581 | None | None | N |
D/I | 0.6281 | likely_pathogenic | 0.5829 | pathogenic | 0.312 | Stabilizing | 0.993 | D | 0.681 | prob.neutral | None | None | None | None | N |
D/K | 0.665 | likely_pathogenic | 0.5989 | pathogenic | 0.108 | Stabilizing | 0.986 | D | 0.58 | neutral | None | None | None | None | N |
D/L | 0.6911 | likely_pathogenic | 0.6354 | pathogenic | 0.312 | Stabilizing | 0.993 | D | 0.665 | neutral | None | None | None | None | N |
D/M | 0.8505 | likely_pathogenic | 0.8137 | pathogenic | 0.417 | Stabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | N |
D/N | 0.0932 | likely_benign | 0.0977 | benign | -0.322 | Destabilizing | 0.1 | N | 0.26 | neutral | N | 0.479970768 | None | None | N |
D/P | 0.7183 | likely_pathogenic | 0.6972 | pathogenic | 0.117 | Stabilizing | 0.993 | D | 0.64 | neutral | None | None | None | None | N |
D/Q | 0.6077 | likely_pathogenic | 0.5563 | ambiguous | -0.23 | Destabilizing | 0.993 | D | 0.567 | neutral | None | None | None | None | N |
D/R | 0.6593 | likely_pathogenic | 0.5872 | pathogenic | 0.364 | Stabilizing | 0.986 | D | 0.642 | neutral | None | None | None | None | N |
D/S | 0.1534 | likely_benign | 0.1492 | benign | -0.453 | Destabilizing | 0.647 | D | 0.251 | neutral | None | None | None | None | N |
D/T | 0.3619 | ambiguous | 0.3297 | benign | -0.24 | Destabilizing | 0.91 | D | 0.533 | neutral | None | None | None | None | N |
D/V | 0.4673 | ambiguous | 0.4184 | ambiguous | 0.117 | Stabilizing | 0.991 | D | 0.681 | prob.neutral | N | 0.492486963 | None | None | N |
D/W | 0.9601 | likely_pathogenic | 0.9422 | pathogenic | 0.16 | Stabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | N |
D/Y | 0.3997 | ambiguous | 0.35 | ambiguous | 0.22 | Stabilizing | 0.999 | D | 0.651 | neutral | N | 0.516124626 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.