Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9121 | 27586;27587;27588 | chr2:178712561;178712560;178712559 | chr2:179577288;179577287;179577286 |
N2AB | 8804 | 26635;26636;26637 | chr2:178712561;178712560;178712559 | chr2:179577288;179577287;179577286 |
N2A | 7877 | 23854;23855;23856 | chr2:178712561;178712560;178712559 | chr2:179577288;179577287;179577286 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs774681899 | 0.118 | 0.975 | N | 0.222 | 0.344 | 0.589725459201 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
Y/C | rs774681899 | 0.118 | 0.975 | N | 0.222 | 0.344 | 0.589725459201 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Y/C | rs774681899 | 0.118 | 0.975 | N | 0.222 | 0.344 | 0.589725459201 | gnomAD-4.0.0 | 1.30186E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.61084E-05 | 0 | 3.20451E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.2242 | likely_benign | 0.2515 | benign | -1.884 | Destabilizing | 0.495 | N | 0.209 | neutral | None | None | None | None | I |
Y/C | 0.0874 | likely_benign | 0.0886 | benign | -0.918 | Destabilizing | 0.975 | D | 0.222 | neutral | N | 0.494231797 | None | None | I |
Y/D | 0.1473 | likely_benign | 0.1592 | benign | -0.413 | Destabilizing | 0.642 | D | 0.363 | neutral | N | 0.520628965 | None | None | I |
Y/E | 0.3951 | ambiguous | 0.4228 | ambiguous | -0.325 | Destabilizing | 0.543 | D | 0.301 | neutral | None | None | None | None | I |
Y/F | 0.0812 | likely_benign | 0.0861 | benign | -0.737 | Destabilizing | 0.006 | N | 0.144 | neutral | N | 0.519935531 | None | None | I |
Y/G | 0.2625 | likely_benign | 0.271 | benign | -2.204 | Highly Destabilizing | 0.828 | D | 0.347 | neutral | None | None | None | None | I |
Y/H | 0.1079 | likely_benign | 0.1152 | benign | -0.835 | Destabilizing | 0.927 | D | 0.331 | neutral | N | 0.442245539 | None | None | I |
Y/I | 0.197 | likely_benign | 0.2093 | benign | -0.929 | Destabilizing | 0.031 | N | 0.175 | neutral | None | None | None | None | I |
Y/K | 0.3447 | ambiguous | 0.3563 | ambiguous | -1.064 | Destabilizing | 0.543 | D | 0.328 | neutral | None | None | None | None | I |
Y/L | 0.2456 | likely_benign | 0.2605 | benign | -0.929 | Destabilizing | 0.003 | N | 0.135 | neutral | None | None | None | None | I |
Y/M | 0.3557 | ambiguous | 0.3845 | ambiguous | -0.787 | Destabilizing | 0.893 | D | 0.283 | neutral | None | None | None | None | I |
Y/N | 0.0968 | likely_benign | 0.1025 | benign | -1.414 | Destabilizing | 0.784 | D | 0.375 | neutral | N | 0.520455606 | None | None | I |
Y/P | 0.8703 | likely_pathogenic | 0.8466 | pathogenic | -1.24 | Destabilizing | 0.981 | D | 0.357 | neutral | None | None | None | None | I |
Y/Q | 0.2566 | likely_benign | 0.2726 | benign | -1.243 | Destabilizing | 0.085 | N | 0.157 | neutral | None | None | None | None | I |
Y/R | 0.2271 | likely_benign | 0.2373 | benign | -0.819 | Destabilizing | 0.704 | D | 0.374 | neutral | None | None | None | None | I |
Y/S | 0.0914 | likely_benign | 0.1019 | benign | -1.924 | Destabilizing | 0.473 | N | 0.284 | neutral | N | 0.487169752 | None | None | I |
Y/T | 0.1613 | likely_benign | 0.1734 | benign | -1.728 | Destabilizing | 0.031 | N | 0.221 | neutral | None | None | None | None | I |
Y/V | 0.1613 | likely_benign | 0.175 | benign | -1.24 | Destabilizing | 0.013 | N | 0.127 | neutral | None | None | None | None | I |
Y/W | 0.4208 | ambiguous | 0.4193 | ambiguous | -0.447 | Destabilizing | 0.981 | D | 0.352 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.