Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9126 | 27601;27602;27603 | chr2:178712546;178712545;178712544 | chr2:179577273;179577272;179577271 |
N2AB | 8809 | 26650;26651;26652 | chr2:178712546;178712545;178712544 | chr2:179577273;179577272;179577271 |
N2A | 7882 | 23869;23870;23871 | chr2:178712546;178712545;178712544 | chr2:179577273;179577272;179577271 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 1.0 | D | 0.851 | 0.758 | 0.877092428509 | gnomAD-4.0.0 | 1.59228E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43324E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3138 | likely_benign | 0.3383 | benign | -0.443 | Destabilizing | 1.0 | D | 0.779 | deleterious | D | 0.625915449 | None | None | I |
G/C | 0.4804 | ambiguous | 0.5199 | ambiguous | -0.953 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | I |
G/D | 0.1804 | likely_benign | 0.1946 | benign | -0.458 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
G/E | 0.191 | likely_benign | 0.2188 | benign | -0.599 | Destabilizing | 1.0 | D | 0.835 | deleterious | D | 0.601054189 | None | None | I |
G/F | 0.787 | likely_pathogenic | 0.8145 | pathogenic | -1.044 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
G/H | 0.55 | ambiguous | 0.5854 | pathogenic | -0.706 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | I |
G/I | 0.7336 | likely_pathogenic | 0.7638 | pathogenic | -0.454 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | I |
G/K | 0.5399 | ambiguous | 0.6017 | pathogenic | -0.854 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
G/L | 0.6657 | likely_pathogenic | 0.7063 | pathogenic | -0.454 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
G/M | 0.6794 | likely_pathogenic | 0.7194 | pathogenic | -0.438 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
G/N | 0.2702 | likely_benign | 0.2724 | benign | -0.537 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
G/P | 0.9773 | likely_pathogenic | 0.9739 | pathogenic | -0.414 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | I |
G/Q | 0.364 | ambiguous | 0.4129 | ambiguous | -0.803 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
G/R | 0.4395 | ambiguous | 0.4963 | ambiguous | -0.447 | Destabilizing | 1.0 | D | 0.851 | deleterious | D | 0.626117253 | None | None | I |
G/S | 0.1699 | likely_benign | 0.1759 | benign | -0.771 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
G/T | 0.3902 | ambiguous | 0.4215 | ambiguous | -0.832 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
G/V | 0.569 | likely_pathogenic | 0.6101 | pathogenic | -0.414 | Destabilizing | 1.0 | D | 0.823 | deleterious | D | 0.658589944 | None | None | I |
G/W | 0.6 | likely_pathogenic | 0.6324 | pathogenic | -1.208 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
G/Y | 0.6042 | likely_pathogenic | 0.6391 | pathogenic | -0.849 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.