Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9128 | 27607;27608;27609 | chr2:178712540;178712539;178712538 | chr2:179577267;179577266;179577265 |
N2AB | 8811 | 26656;26657;26658 | chr2:178712540;178712539;178712538 | chr2:179577267;179577266;179577265 |
N2A | 7884 | 23875;23876;23877 | chr2:178712540;178712539;178712538 | chr2:179577267;179577266;179577265 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.521 | N | 0.382 | 0.122 | 0.323886383625 | gnomAD-4.0.0 | 1.36872E-06 | None | None | None | None | I | None | 2.98829E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9957E-07 | 0 | 0 |
P/S | rs1283675898 | -0.945 | 0.028 | N | 0.218 | 0.051 | 0.107399877778 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
P/S | rs1283675898 | -0.945 | 0.028 | N | 0.218 | 0.051 | 0.107399877778 | gnomAD-4.0.0 | 3.18424E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86615E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0796 | likely_benign | 0.0723 | benign | -1.121 | Destabilizing | 0.007 | N | 0.221 | neutral | N | 0.507733372 | None | None | I |
P/C | 0.4796 | ambiguous | 0.4008 | ambiguous | -0.898 | Destabilizing | 0.987 | D | 0.392 | neutral | None | None | None | None | I |
P/D | 0.3977 | ambiguous | 0.363 | ambiguous | -0.615 | Destabilizing | 0.59 | D | 0.283 | neutral | None | None | None | None | I |
P/E | 0.3052 | likely_benign | 0.2925 | benign | -0.635 | Destabilizing | 0.59 | D | 0.312 | neutral | None | None | None | None | I |
P/F | 0.3857 | ambiguous | 0.345 | ambiguous | -0.846 | Destabilizing | 0.953 | D | 0.384 | neutral | None | None | None | None | I |
P/G | 0.259 | likely_benign | 0.239 | benign | -1.404 | Destabilizing | 0.59 | D | 0.342 | neutral | None | None | None | None | I |
P/H | 0.1714 | likely_benign | 0.1395 | benign | -0.812 | Destabilizing | 0.939 | D | 0.359 | neutral | N | 0.463529701 | None | None | I |
P/I | 0.2673 | likely_benign | 0.2493 | benign | -0.466 | Destabilizing | 0.91 | D | 0.404 | neutral | None | None | None | None | I |
P/K | 0.3021 | likely_benign | 0.2929 | benign | -0.941 | Destabilizing | 0.037 | N | 0.208 | neutral | None | None | None | None | I |
P/L | 0.1157 | likely_benign | 0.1057 | benign | -0.466 | Destabilizing | 0.521 | D | 0.382 | neutral | N | 0.502962271 | None | None | I |
P/M | 0.271 | likely_benign | 0.2497 | benign | -0.443 | Destabilizing | 0.987 | D | 0.359 | neutral | None | None | None | None | I |
P/N | 0.2262 | likely_benign | 0.2004 | benign | -0.734 | Destabilizing | 0.02 | N | 0.251 | neutral | None | None | None | None | I |
P/Q | 0.1566 | likely_benign | 0.1444 | benign | -0.886 | Destabilizing | 0.082 | N | 0.241 | neutral | None | None | None | None | I |
P/R | 0.1904 | likely_benign | 0.1826 | benign | -0.423 | Destabilizing | 0.521 | D | 0.346 | neutral | N | 0.491398483 | None | None | I |
P/S | 0.1034 | likely_benign | 0.0926 | benign | -1.284 | Destabilizing | 0.028 | N | 0.218 | neutral | N | 0.414628423 | None | None | I |
P/T | 0.0999 | likely_benign | 0.0922 | benign | -1.184 | Destabilizing | 0.521 | D | 0.298 | neutral | N | 0.445239332 | None | None | I |
P/V | 0.1889 | likely_benign | 0.176 | benign | -0.648 | Destabilizing | 0.59 | D | 0.332 | neutral | None | None | None | None | I |
P/W | 0.574 | likely_pathogenic | 0.524 | ambiguous | -0.976 | Destabilizing | 0.996 | D | 0.554 | neutral | None | None | None | None | I |
P/Y | 0.324 | likely_benign | 0.2869 | benign | -0.693 | Destabilizing | 0.984 | D | 0.389 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.