Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9130 | 27613;27614;27615 | chr2:178712534;178712533;178712532 | chr2:179577261;179577260;179577259 |
N2AB | 8813 | 26662;26663;26664 | chr2:178712534;178712533;178712532 | chr2:179577261;179577260;179577259 |
N2A | 7886 | 23881;23882;23883 | chr2:178712534;178712533;178712532 | chr2:179577261;179577260;179577259 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | rs1316381392 | -0.742 | 0.784 | N | 0.547 | 0.157 | 0.584426982296 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
I/N | rs1316381392 | -0.742 | 0.784 | N | 0.547 | 0.157 | 0.584426982296 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 7.35E-05 | 0 | 0 |
I/N | rs1316381392 | -0.742 | 0.784 | N | 0.547 | 0.157 | 0.584426982296 | gnomAD-4.0.0 | 2.72701E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.64489E-05 | 0 | 1.60174E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4842 | ambiguous | 0.4894 | ambiguous | -1.787 | Destabilizing | 0.329 | N | 0.417 | neutral | None | None | None | None | N |
I/C | 0.7061 | likely_pathogenic | 0.7008 | pathogenic | -1.099 | Destabilizing | 0.995 | D | 0.501 | neutral | None | None | None | None | N |
I/D | 0.8435 | likely_pathogenic | 0.8378 | pathogenic | -1.44 | Destabilizing | 0.828 | D | 0.547 | neutral | None | None | None | None | N |
I/E | 0.7052 | likely_pathogenic | 0.7116 | pathogenic | -1.348 | Destabilizing | 0.704 | D | 0.514 | neutral | None | None | None | None | N |
I/F | 0.1485 | likely_benign | 0.1395 | benign | -1.017 | Destabilizing | 0.927 | D | 0.463 | neutral | N | 0.457907387 | None | None | N |
I/G | 0.7829 | likely_pathogenic | 0.7684 | pathogenic | -2.18 | Highly Destabilizing | 0.828 | D | 0.523 | neutral | None | None | None | None | N |
I/H | 0.4657 | ambiguous | 0.4651 | ambiguous | -1.301 | Destabilizing | 0.981 | D | 0.516 | neutral | None | None | None | None | N |
I/K | 0.4054 | ambiguous | 0.4246 | ambiguous | -1.379 | Destabilizing | 0.031 | N | 0.421 | neutral | None | None | None | None | N |
I/L | 0.1041 | likely_benign | 0.0933 | benign | -0.736 | Destabilizing | 0.139 | N | 0.285 | neutral | N | 0.480392055 | None | None | N |
I/M | 0.1236 | likely_benign | 0.1186 | benign | -0.663 | Destabilizing | 0.927 | D | 0.479 | neutral | N | 0.45380601 | None | None | N |
I/N | 0.383 | ambiguous | 0.3843 | ambiguous | -1.369 | Destabilizing | 0.784 | D | 0.547 | neutral | N | 0.455185135 | None | None | N |
I/P | 0.9257 | likely_pathogenic | 0.902 | pathogenic | -1.059 | Destabilizing | 0.981 | D | 0.568 | neutral | None | None | None | None | N |
I/Q | 0.4686 | ambiguous | 0.4785 | ambiguous | -1.419 | Destabilizing | 0.893 | D | 0.566 | neutral | None | None | None | None | N |
I/R | 0.2937 | likely_benign | 0.3067 | benign | -0.87 | Destabilizing | 0.007 | N | 0.449 | neutral | None | None | None | None | N |
I/S | 0.3988 | ambiguous | 0.41 | ambiguous | -1.994 | Destabilizing | 0.27 | N | 0.497 | neutral | N | 0.478487901 | None | None | N |
I/T | 0.2927 | likely_benign | 0.3095 | benign | -1.774 | Destabilizing | 0.01 | N | 0.312 | neutral | N | 0.416281862 | None | None | N |
I/V | 0.0865 | likely_benign | 0.0914 | benign | -1.059 | Destabilizing | 0.002 | N | 0.199 | neutral | N | 0.436697206 | None | None | N |
I/W | 0.7481 | likely_pathogenic | 0.7095 | pathogenic | -1.171 | Destabilizing | 0.995 | D | 0.535 | neutral | None | None | None | None | N |
I/Y | 0.4381 | ambiguous | 0.4351 | ambiguous | -0.935 | Destabilizing | 0.981 | D | 0.53 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.