Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9134 | 27625;27626;27627 | chr2:178712522;178712521;178712520 | chr2:179577249;179577248;179577247 |
N2AB | 8817 | 26674;26675;26676 | chr2:178712522;178712521;178712520 | chr2:179577249;179577248;179577247 |
N2A | 7890 | 23893;23894;23895 | chr2:178712522;178712521;178712520 | chr2:179577249;179577248;179577247 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1023873134 | None | 0.001 | N | 0.348 | 0.113 | 0.425970041486 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
T/I | rs1023873134 | None | 0.001 | N | 0.348 | 0.113 | 0.425970041486 | gnomAD-4.0.0 | 8.05683E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.01717E-05 | 0 | 1.60143E-05 |
T/R | rs1023873134 | -0.262 | 0.484 | N | 0.641 | 0.226 | 0.508994031223 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/R | rs1023873134 | -0.262 | 0.484 | N | 0.641 | 0.226 | 0.508994031223 | gnomAD-4.0.0 | 6.84265E-07 | None | None | None | None | N | None | 0 | 2.23734E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0851 | likely_benign | 0.1054 | benign | -1.254 | Destabilizing | 0.027 | N | 0.447 | neutral | N | 0.505219582 | None | None | N |
T/C | 0.4192 | ambiguous | 0.5055 | ambiguous | -0.795 | Destabilizing | 0.935 | D | 0.631 | neutral | None | None | None | None | N |
T/D | 0.4023 | ambiguous | 0.4935 | ambiguous | -0.76 | Destabilizing | 0.38 | N | 0.591 | neutral | None | None | None | None | N |
T/E | 0.3327 | likely_benign | 0.3878 | ambiguous | -0.622 | Destabilizing | 0.38 | N | 0.583 | neutral | None | None | None | None | N |
T/F | 0.1962 | likely_benign | 0.2417 | benign | -1.004 | Destabilizing | 0.235 | N | 0.682 | prob.neutral | None | None | None | None | N |
T/G | 0.2806 | likely_benign | 0.3629 | ambiguous | -1.615 | Destabilizing | 0.149 | N | 0.609 | neutral | None | None | None | None | N |
T/H | 0.2623 | likely_benign | 0.3127 | benign | -1.652 | Destabilizing | 0.935 | D | 0.687 | prob.neutral | None | None | None | None | N |
T/I | 0.0979 | likely_benign | 0.127 | benign | -0.328 | Destabilizing | 0.001 | N | 0.348 | neutral | N | 0.507337167 | None | None | N |
T/K | 0.2592 | likely_benign | 0.2908 | benign | -0.5 | Destabilizing | 0.117 | N | 0.58 | neutral | N | 0.47932106 | None | None | N |
T/L | 0.0862 | likely_benign | 0.1028 | benign | -0.328 | Destabilizing | 0.001 | N | 0.373 | neutral | None | None | None | None | N |
T/M | 0.0856 | likely_benign | 0.0934 | benign | -0.265 | Destabilizing | 0.235 | N | 0.646 | neutral | None | None | None | None | N |
T/N | 0.1093 | likely_benign | 0.1425 | benign | -0.869 | Destabilizing | 0.38 | N | 0.5 | neutral | None | None | None | None | N |
T/P | 0.2753 | likely_benign | 0.3516 | ambiguous | -0.606 | Destabilizing | 0.484 | N | 0.644 | neutral | D | 0.526192287 | None | None | N |
T/Q | 0.2502 | likely_benign | 0.2851 | benign | -0.822 | Destabilizing | 0.555 | D | 0.649 | neutral | None | None | None | None | N |
T/R | 0.1974 | likely_benign | 0.2284 | benign | -0.531 | Destabilizing | 0.484 | N | 0.641 | neutral | N | 0.467874702 | None | None | N |
T/S | 0.1051 | likely_benign | 0.1343 | benign | -1.222 | Destabilizing | 0.005 | N | 0.2 | neutral | N | 0.472723161 | None | None | N |
T/V | 0.1022 | likely_benign | 0.1309 | benign | -0.606 | Destabilizing | 0.035 | N | 0.465 | neutral | None | None | None | None | N |
T/W | 0.6228 | likely_pathogenic | 0.6701 | pathogenic | -0.978 | Destabilizing | 0.935 | D | 0.725 | prob.delet. | None | None | None | None | N |
T/Y | 0.2582 | likely_benign | 0.3116 | benign | -0.675 | Destabilizing | 0.555 | D | 0.697 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.