Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9135 | 27628;27629;27630 | chr2:178712519;178712518;178712517 | chr2:179577246;179577245;179577244 |
N2AB | 8818 | 26677;26678;26679 | chr2:178712519;178712518;178712517 | chr2:179577246;179577245;179577244 |
N2A | 7891 | 23896;23897;23898 | chr2:178712519;178712518;178712517 | chr2:179577246;179577245;179577244 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.055 | N | 0.675 | 0.19 | 0.251116650651 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9017 | likely_pathogenic | 0.8926 | pathogenic | -2.646 | Highly Destabilizing | 0.272 | N | 0.755 | deleterious | None | None | None | None | N |
F/C | 0.4523 | ambiguous | 0.439 | ambiguous | -1.878 | Destabilizing | 0.958 | D | 0.801 | deleterious | N | 0.500607487 | None | None | N |
F/D | 0.9855 | likely_pathogenic | 0.9838 | pathogenic | -2.533 | Highly Destabilizing | 0.726 | D | 0.841 | deleterious | None | None | None | None | N |
F/E | 0.9895 | likely_pathogenic | 0.989 | pathogenic | -2.334 | Highly Destabilizing | 0.726 | D | 0.832 | deleterious | None | None | None | None | N |
F/G | 0.9606 | likely_pathogenic | 0.9572 | pathogenic | -3.083 | Highly Destabilizing | 0.726 | D | 0.806 | deleterious | None | None | None | None | N |
F/H | 0.7967 | likely_pathogenic | 0.8004 | pathogenic | -1.648 | Destabilizing | 0.567 | D | 0.787 | deleterious | None | None | None | None | N |
F/I | 0.54 | ambiguous | 0.5078 | ambiguous | -1.243 | Destabilizing | 0.22 | N | 0.717 | prob.delet. | N | 0.479238128 | None | None | N |
F/K | 0.9852 | likely_pathogenic | 0.9857 | pathogenic | -1.792 | Destabilizing | 0.567 | D | 0.832 | deleterious | None | None | None | None | N |
F/L | 0.9362 | likely_pathogenic | 0.9329 | pathogenic | -1.243 | Destabilizing | 0.055 | N | 0.675 | prob.neutral | N | 0.49975226 | None | None | N |
F/M | 0.8322 | likely_pathogenic | 0.8225 | pathogenic | -1.152 | Destabilizing | 0.726 | D | 0.729 | prob.delet. | None | None | None | None | N |
F/N | 0.9329 | likely_pathogenic | 0.9332 | pathogenic | -2.171 | Highly Destabilizing | 0.726 | D | 0.842 | deleterious | None | None | None | None | N |
F/P | 0.9968 | likely_pathogenic | 0.9966 | pathogenic | -1.718 | Destabilizing | 0.89 | D | 0.835 | deleterious | None | None | None | None | N |
F/Q | 0.9718 | likely_pathogenic | 0.971 | pathogenic | -2.122 | Highly Destabilizing | 0.726 | D | 0.849 | deleterious | None | None | None | None | N |
F/R | 0.9593 | likely_pathogenic | 0.9592 | pathogenic | -1.356 | Destabilizing | 0.567 | D | 0.845 | deleterious | None | None | None | None | N |
F/S | 0.8671 | likely_pathogenic | 0.8534 | pathogenic | -2.914 | Highly Destabilizing | 0.497 | N | 0.797 | deleterious | N | 0.507969099 | None | None | N |
F/T | 0.9103 | likely_pathogenic | 0.9013 | pathogenic | -2.603 | Highly Destabilizing | 0.567 | D | 0.796 | deleterious | None | None | None | None | N |
F/V | 0.5071 | ambiguous | 0.469 | ambiguous | -1.718 | Destabilizing | 0.22 | N | 0.735 | prob.delet. | N | 0.396344599 | None | None | N |
F/W | 0.5048 | ambiguous | 0.4827 | ambiguous | -0.296 | Destabilizing | 0.726 | D | 0.701 | prob.neutral | None | None | None | None | N |
F/Y | 0.0711 | likely_benign | 0.0738 | benign | -0.636 | Destabilizing | None | N | 0.202 | neutral | N | 0.455617481 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.