Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9147 | 27664;27665;27666 | chr2:178712483;178712482;178712481 | chr2:179577210;179577209;179577208 |
N2AB | 8830 | 26713;26714;26715 | chr2:178712483;178712482;178712481 | chr2:179577210;179577209;179577208 |
N2A | 7903 | 23932;23933;23934 | chr2:178712483;178712482;178712481 | chr2:179577210;179577209;179577208 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.994 | D | 0.503 | 0.542 | 0.431379191433 | gnomAD-4.0.0 | 1.20032E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9267 | likely_pathogenic | 0.9023 | pathogenic | -0.922 | Destabilizing | 0.992 | D | 0.508 | neutral | None | None | None | None | N |
K/C | 0.8953 | likely_pathogenic | 0.8724 | pathogenic | -0.948 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
K/D | 0.981 | likely_pathogenic | 0.9703 | pathogenic | -0.187 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
K/E | 0.7812 | likely_pathogenic | 0.7085 | pathogenic | -0.051 | Destabilizing | 0.994 | D | 0.503 | neutral | D | 0.540641798 | None | None | N |
K/F | 0.93 | likely_pathogenic | 0.9172 | pathogenic | -0.714 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
K/G | 0.9517 | likely_pathogenic | 0.926 | pathogenic | -1.294 | Destabilizing | 0.999 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/H | 0.5798 | likely_pathogenic | 0.5684 | pathogenic | -1.673 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/I | 0.6959 | likely_pathogenic | 0.6858 | pathogenic | 0.057 | Stabilizing | 0.997 | D | 0.779 | deleterious | N | 0.501355415 | None | None | N |
K/L | 0.7117 | likely_pathogenic | 0.6543 | pathogenic | 0.057 | Stabilizing | 0.992 | D | 0.656 | neutral | None | None | None | None | N |
K/M | 0.5461 | ambiguous | 0.4855 | ambiguous | 0.017 | Stabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
K/N | 0.8802 | likely_pathogenic | 0.8364 | pathogenic | -0.642 | Destabilizing | 0.998 | D | 0.605 | neutral | D | 0.522284054 | None | None | N |
K/P | 0.9967 | likely_pathogenic | 0.9946 | pathogenic | -0.241 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
K/Q | 0.3943 | ambiguous | 0.3421 | ambiguous | -0.708 | Destabilizing | 0.999 | D | 0.601 | neutral | N | 0.521777075 | None | None | N |
K/R | 0.0969 | likely_benign | 0.0903 | benign | -0.664 | Destabilizing | 0.994 | D | 0.561 | neutral | N | 0.465041092 | None | None | N |
K/S | 0.9477 | likely_pathogenic | 0.928 | pathogenic | -1.414 | Destabilizing | 0.983 | D | 0.48 | neutral | None | None | None | None | N |
K/T | 0.883 | likely_pathogenic | 0.8527 | pathogenic | -1.054 | Destabilizing | 0.543 | D | 0.409 | neutral | N | 0.513636773 | None | None | N |
K/V | 0.7142 | likely_pathogenic | 0.7226 | pathogenic | -0.241 | Destabilizing | 0.998 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/W | 0.909 | likely_pathogenic | 0.8935 | pathogenic | -0.541 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
K/Y | 0.7687 | likely_pathogenic | 0.7413 | pathogenic | -0.219 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.