Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9150 | 27673;27674;27675 | chr2:178712474;178712473;178712472 | chr2:179577201;179577200;179577199 |
N2AB | 8833 | 26722;26723;26724 | chr2:178712474;178712473;178712472 | chr2:179577201;179577200;179577199 |
N2A | 7906 | 23941;23942;23943 | chr2:178712474;178712473;178712472 | chr2:179577201;179577200;179577199 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs1553891488 | None | 0.304 | N | 0.276 | 0.037 | 0.300110245524 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/M | rs1553891488 | None | 0.304 | N | 0.276 | 0.037 | 0.300110245524 | gnomAD-4.0.0 | 6.57367E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47059E-05 | 0 | 0 |
I/V | None | None | None | N | 0.141 | 0.071 | 0.17948927462 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1564 | likely_benign | 0.1535 | benign | -0.598 | Destabilizing | 0.006 | N | 0.237 | neutral | None | None | None | None | N |
I/C | 0.372 | ambiguous | 0.3452 | ambiguous | -0.603 | Destabilizing | 0.781 | D | 0.294 | neutral | None | None | None | None | N |
I/D | 0.2924 | likely_benign | 0.2754 | benign | -0.206 | Destabilizing | 0.064 | N | 0.371 | neutral | None | None | None | None | N |
I/E | 0.2096 | likely_benign | 0.1947 | benign | -0.302 | Destabilizing | 0.033 | N | 0.356 | neutral | None | None | None | None | N |
I/F | 0.0788 | likely_benign | 0.0787 | benign | -0.626 | Destabilizing | 0.076 | N | 0.284 | neutral | None | None | None | None | N |
I/G | 0.2916 | likely_benign | 0.2785 | benign | -0.756 | Destabilizing | None | N | 0.193 | neutral | None | None | None | None | N |
I/H | 0.1911 | likely_benign | 0.1857 | benign | -0.038 | Destabilizing | 0.54 | D | 0.353 | neutral | None | None | None | None | N |
I/K | 0.1295 | likely_benign | 0.1253 | benign | -0.341 | Destabilizing | 0.001 | N | 0.217 | neutral | N | 0.39152593 | None | None | N |
I/L | 0.083 | likely_benign | 0.079 | benign | -0.307 | Destabilizing | None | N | 0.163 | neutral | N | 0.450248947 | None | None | N |
I/M | 0.0703 | likely_benign | 0.0692 | benign | -0.368 | Destabilizing | 0.304 | N | 0.276 | neutral | N | 0.478512983 | None | None | N |
I/N | 0.0993 | likely_benign | 0.0958 | benign | -0.134 | Destabilizing | 0.064 | N | 0.415 | neutral | None | None | None | None | N |
I/P | 0.7436 | likely_pathogenic | 0.666 | pathogenic | -0.371 | Destabilizing | 0.251 | N | 0.461 | neutral | None | None | None | None | N |
I/Q | 0.1427 | likely_benign | 0.1374 | benign | -0.366 | Destabilizing | 0.003 | N | 0.205 | neutral | None | None | None | None | N |
I/R | 0.098 | likely_benign | 0.093 | benign | 0.229 | Stabilizing | 0.059 | N | 0.426 | neutral | N | 0.455212049 | None | None | N |
I/S | 0.128 | likely_benign | 0.1248 | benign | -0.576 | Destabilizing | 0.003 | N | 0.175 | neutral | None | None | None | None | N |
I/T | 0.1097 | likely_benign | 0.1123 | benign | -0.563 | Destabilizing | None | N | 0.171 | neutral | N | 0.460329867 | None | None | N |
I/V | 0.07 | likely_benign | 0.0713 | benign | -0.371 | Destabilizing | None | N | 0.141 | neutral | N | 0.398897406 | None | None | N |
I/W | 0.3878 | ambiguous | 0.3617 | ambiguous | -0.64 | Destabilizing | 0.931 | D | 0.334 | neutral | None | None | None | None | N |
I/Y | 0.2078 | likely_benign | 0.2018 | benign | -0.392 | Destabilizing | 0.251 | N | 0.368 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.