Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9151 | 27676;27677;27678 | chr2:178712471;178712470;178712469 | chr2:179577198;179577197;179577196 |
N2AB | 8834 | 26725;26726;26727 | chr2:178712471;178712470;178712469 | chr2:179577198;179577197;179577196 |
N2A | 7907 | 23944;23945;23946 | chr2:178712471;178712470;178712469 | chr2:179577198;179577197;179577196 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs752655439 | 0.001 | 0.028 | N | 0.197 | 0.1 | 0.115124310173 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
N/S | rs752655439 | 0.001 | 0.028 | N | 0.197 | 0.1 | 0.115124310173 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 4.14422E-04 | 0 |
N/S | rs752655439 | 0.001 | 0.028 | N | 0.197 | 0.1 | 0.115124310173 | gnomAD-4.0.0 | 8.67595E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.53711E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.0907 | likely_benign | 0.0881 | benign | -0.371 | Destabilizing | 0.036 | N | 0.278 | neutral | None | None | None | None | N |
N/C | 0.1935 | likely_benign | 0.1758 | benign | 0.293 | Stabilizing | 0.901 | D | 0.375 | neutral | None | None | None | None | N |
N/D | 0.0775 | likely_benign | 0.0743 | benign | 0.135 | Stabilizing | 0.061 | N | 0.212 | neutral | N | 0.4722963 | None | None | N |
N/E | 0.1598 | likely_benign | 0.1543 | benign | 0.112 | Stabilizing | None | N | 0.077 | neutral | None | None | None | None | N |
N/F | 0.2576 | likely_benign | 0.2403 | benign | -0.639 | Destabilizing | 0.296 | N | 0.471 | neutral | None | None | None | None | N |
N/G | 0.1814 | likely_benign | 0.1623 | benign | -0.566 | Destabilizing | 0.148 | N | 0.2 | neutral | None | None | None | None | N |
N/H | 0.0774 | likely_benign | 0.0763 | benign | -0.547 | Destabilizing | 0.693 | D | 0.273 | neutral | N | 0.512990916 | None | None | N |
N/I | 0.0877 | likely_benign | 0.0875 | benign | 0.061 | Stabilizing | 0.001 | N | 0.282 | neutral | N | 0.437109078 | None | None | N |
N/K | 0.14 | likely_benign | 0.1401 | benign | 0.049 | Stabilizing | None | N | 0.075 | neutral | N | 0.444744339 | None | None | N |
N/L | 0.1127 | likely_benign | 0.1077 | benign | 0.061 | Stabilizing | 0.001 | N | 0.222 | neutral | None | None | None | None | N |
N/M | 0.1646 | likely_benign | 0.1569 | benign | 0.351 | Stabilizing | 0.596 | D | 0.401 | neutral | None | None | None | None | N |
N/P | 0.1721 | likely_benign | 0.1578 | benign | -0.055 | Destabilizing | 0.46 | N | 0.429 | neutral | None | None | None | None | N |
N/Q | 0.1645 | likely_benign | 0.1612 | benign | -0.406 | Destabilizing | 0.007 | N | 0.078 | neutral | None | None | None | None | N |
N/R | 0.1484 | likely_benign | 0.15 | benign | 0.091 | Stabilizing | 0.001 | N | 0.106 | neutral | None | None | None | None | N |
N/S | 0.0628 | likely_benign | 0.0609 | benign | -0.208 | Destabilizing | 0.028 | N | 0.197 | neutral | N | 0.454230614 | None | None | N |
N/T | 0.07 | likely_benign | 0.0691 | benign | -0.082 | Destabilizing | 0.116 | N | 0.194 | neutral | N | 0.452499818 | None | None | N |
N/V | 0.0969 | likely_benign | 0.0962 | benign | -0.055 | Destabilizing | 0.08 | N | 0.36 | neutral | None | None | None | None | N |
N/W | 0.4898 | ambiguous | 0.4614 | ambiguous | -0.587 | Destabilizing | 0.972 | D | 0.386 | neutral | None | None | None | None | N |
N/Y | 0.1008 | likely_benign | 0.098 | benign | -0.338 | Destabilizing | 0.662 | D | 0.449 | neutral | N | 0.519263528 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.