Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9160 | 27703;27704;27705 | chr2:178712444;178712443;178712442 | chr2:179577171;179577170;179577169 |
N2AB | 8843 | 26752;26753;26754 | chr2:178712444;178712443;178712442 | chr2:179577171;179577170;179577169 |
N2A | 7916 | 23971;23972;23973 | chr2:178712444;178712443;178712442 | chr2:179577171;179577170;179577169 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs2076799987 | None | 0.006 | D | 0.347 | 0.362 | 0.733868726719 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs2076799987 | None | 0.006 | D | 0.347 | 0.362 | 0.733868726719 | gnomAD-4.0.0 | 6.57445E-06 | None | None | None | None | I | None | 2.41476E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5165 | ambiguous | 0.4233 | ambiguous | -2.209 | Highly Destabilizing | 0.207 | N | 0.464 | neutral | None | None | None | None | I |
I/C | 0.7214 | likely_pathogenic | 0.6411 | pathogenic | -1.388 | Destabilizing | 0.981 | D | 0.564 | neutral | None | None | None | None | I |
I/D | 0.8819 | likely_pathogenic | 0.8559 | pathogenic | -1.969 | Destabilizing | 0.818 | D | 0.617 | neutral | None | None | None | None | I |
I/E | 0.7431 | likely_pathogenic | 0.6813 | pathogenic | -1.88 | Destabilizing | 0.818 | D | 0.625 | neutral | None | None | None | None | I |
I/F | 0.1548 | likely_benign | 0.1397 | benign | -1.521 | Destabilizing | 0.527 | D | 0.487 | neutral | None | None | None | None | I |
I/G | 0.8129 | likely_pathogenic | 0.7421 | pathogenic | -2.642 | Highly Destabilizing | 0.818 | D | 0.617 | neutral | None | None | None | None | I |
I/H | 0.6324 | likely_pathogenic | 0.5785 | pathogenic | -1.98 | Destabilizing | 0.981 | D | 0.645 | neutral | None | None | None | None | I |
I/K | 0.5307 | ambiguous | 0.4687 | ambiguous | -1.582 | Destabilizing | 0.627 | D | 0.625 | neutral | N | 0.513893258 | None | None | I |
I/L | 0.1183 | likely_benign | 0.1013 | benign | -1.03 | Destabilizing | 0.001 | N | 0.145 | neutral | N | 0.503448713 | None | None | I |
I/M | 0.105 | likely_benign | 0.0944 | benign | -0.778 | Destabilizing | 0.627 | D | 0.506 | neutral | N | 0.50539294 | None | None | I |
I/N | 0.481 | ambiguous | 0.4224 | ambiguous | -1.529 | Destabilizing | 0.818 | D | 0.631 | neutral | None | None | None | None | I |
I/P | 0.9037 | likely_pathogenic | 0.8734 | pathogenic | -1.396 | Destabilizing | 0.932 | D | 0.629 | neutral | None | None | None | None | I |
I/Q | 0.5752 | likely_pathogenic | 0.5081 | ambiguous | -1.604 | Destabilizing | 0.932 | D | 0.639 | neutral | None | None | None | None | I |
I/R | 0.4214 | ambiguous | 0.3704 | ambiguous | -1.081 | Destabilizing | 0.773 | D | 0.633 | neutral | D | 0.530275993 | None | None | I |
I/S | 0.5002 | ambiguous | 0.4244 | ambiguous | -2.198 | Highly Destabilizing | 0.241 | N | 0.568 | neutral | None | None | None | None | I |
I/T | 0.3629 | ambiguous | 0.2836 | benign | -1.977 | Destabilizing | 0.006 | N | 0.347 | neutral | D | 0.525018851 | None | None | I |
I/V | 0.0844 | likely_benign | 0.0752 | benign | -1.396 | Destabilizing | 0.006 | N | 0.17 | neutral | N | 0.491170062 | None | None | I |
I/W | 0.7159 | likely_pathogenic | 0.6823 | pathogenic | -1.734 | Destabilizing | 0.981 | D | 0.697 | prob.neutral | None | None | None | None | I |
I/Y | 0.4972 | ambiguous | 0.4509 | ambiguous | -1.485 | Destabilizing | 0.818 | D | 0.565 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.