Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9167 | 27724;27725;27726 | chr2:178712423;178712422;178712421 | chr2:179577150;179577149;179577148 |
N2AB | 8850 | 26773;26774;26775 | chr2:178712423;178712422;178712421 | chr2:179577150;179577149;179577148 |
N2A | 7923 | 23992;23993;23994 | chr2:178712423;178712422;178712421 | chr2:179577150;179577149;179577148 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/E | rs777165769 | -2.006 | 0.934 | N | 0.76 | 0.206 | 0.301789629655 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
A/E | rs777165769 | -2.006 | 0.934 | N | 0.76 | 0.206 | 0.301789629655 | gnomAD-4.0.0 | 1.59121E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4551 | ambiguous | 0.4267 | ambiguous | -0.866 | Destabilizing | 0.007 | N | 0.441 | neutral | None | None | None | None | N |
A/D | 0.8684 | likely_pathogenic | 0.8736 | pathogenic | -2.097 | Highly Destabilizing | 0.949 | D | 0.761 | deleterious | None | None | None | None | N |
A/E | 0.82 | likely_pathogenic | 0.8194 | pathogenic | -1.848 | Destabilizing | 0.934 | D | 0.76 | deleterious | N | 0.456541488 | None | None | N |
A/F | 0.5755 | likely_pathogenic | 0.5447 | ambiguous | -0.381 | Destabilizing | 0.974 | D | 0.764 | deleterious | None | None | None | None | N |
A/G | 0.206 | likely_benign | 0.2035 | benign | -1.3 | Destabilizing | 0.669 | D | 0.679 | prob.neutral | N | 0.45393896 | None | None | N |
A/H | 0.8607 | likely_pathogenic | 0.8497 | pathogenic | -1.922 | Destabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | N |
A/I | 0.3563 | ambiguous | 0.3293 | benign | 0.667 | Stabilizing | 0.949 | D | 0.763 | deleterious | None | None | None | None | N |
A/K | 0.9342 | likely_pathogenic | 0.929 | pathogenic | -0.678 | Destabilizing | 0.949 | D | 0.752 | deleterious | None | None | None | None | N |
A/L | 0.3601 | ambiguous | 0.3242 | benign | 0.667 | Stabilizing | 0.728 | D | 0.719 | prob.delet. | None | None | None | None | N |
A/M | 0.3691 | ambiguous | 0.3421 | ambiguous | 0.218 | Stabilizing | 0.998 | D | 0.735 | prob.delet. | None | None | None | None | N |
A/N | 0.7151 | likely_pathogenic | 0.7011 | pathogenic | -1.132 | Destabilizing | 0.949 | D | 0.758 | deleterious | None | None | None | None | N |
A/P | 0.9519 | likely_pathogenic | 0.9476 | pathogenic | 0.23 | Stabilizing | 0.966 | D | 0.761 | deleterious | N | 0.458845666 | None | None | N |
A/Q | 0.8154 | likely_pathogenic | 0.8038 | pathogenic | -0.816 | Destabilizing | 0.974 | D | 0.767 | deleterious | None | None | None | None | N |
A/R | 0.8759 | likely_pathogenic | 0.8707 | pathogenic | -1.057 | Destabilizing | 0.949 | D | 0.771 | deleterious | None | None | None | None | N |
A/S | 0.1382 | likely_benign | 0.1308 | benign | -1.531 | Destabilizing | 0.022 | N | 0.456 | neutral | N | 0.425096133 | None | None | N |
A/T | 0.1095 | likely_benign | 0.1041 | benign | -1.139 | Destabilizing | 0.669 | D | 0.687 | prob.neutral | N | 0.493571996 | None | None | N |
A/V | 0.162 | likely_benign | 0.1528 | benign | 0.23 | Stabilizing | 0.801 | D | 0.698 | prob.neutral | N | 0.50219148 | None | None | N |
A/W | 0.9302 | likely_pathogenic | 0.9211 | pathogenic | -1.249 | Destabilizing | 0.998 | D | 0.779 | deleterious | None | None | None | None | N |
A/Y | 0.7723 | likely_pathogenic | 0.7574 | pathogenic | -0.627 | Destabilizing | 0.991 | D | 0.765 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.