Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9169 | 27730;27731;27732 | chr2:178712417;178712416;178712415 | chr2:179577144;179577143;179577142 |
N2AB | 8852 | 26779;26780;26781 | chr2:178712417;178712416;178712415 | chr2:179577144;179577143;179577142 |
N2A | 7925 | 23998;23999;24000 | chr2:178712417;178712416;178712415 | chr2:179577144;179577143;179577142 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | None | None | 1.0 | D | 0.809 | 0.622 | 0.822590732275 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
L/P | rs769078430 | -1.835 | 1.0 | D | 0.901 | 0.854 | 0.92016668155 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
L/P | rs769078430 | -1.835 | 1.0 | D | 0.901 | 0.854 | 0.92016668155 | gnomAD-4.0.0 | 3.18227E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71595E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8996 | likely_pathogenic | 0.8695 | pathogenic | -2.637 | Highly Destabilizing | 0.999 | D | 0.778 | deleterious | None | None | None | None | N |
L/C | 0.8796 | likely_pathogenic | 0.8629 | pathogenic | -1.963 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/D | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -3.592 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
L/E | 0.9966 | likely_pathogenic | 0.9951 | pathogenic | -3.276 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
L/F | 0.3816 | ambiguous | 0.3362 | benign | -1.676 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
L/G | 0.9895 | likely_pathogenic | 0.9853 | pathogenic | -3.22 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
L/H | 0.9878 | likely_pathogenic | 0.9819 | pathogenic | -2.989 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
L/I | 0.1902 | likely_benign | 0.1724 | benign | -0.878 | Destabilizing | 0.999 | D | 0.692 | prob.neutral | None | None | None | None | N |
L/K | 0.994 | likely_pathogenic | 0.9915 | pathogenic | -2.251 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
L/M | 0.2206 | likely_benign | 0.2072 | benign | -1.027 | Destabilizing | 1.0 | D | 0.809 | deleterious | D | 0.568453648 | None | None | N |
L/N | 0.9979 | likely_pathogenic | 0.9969 | pathogenic | -2.998 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
L/P | 0.9987 | likely_pathogenic | 0.9976 | pathogenic | -1.456 | Destabilizing | 1.0 | D | 0.901 | deleterious | D | 0.569974585 | None | None | N |
L/Q | 0.9795 | likely_pathogenic | 0.9729 | pathogenic | -2.646 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | D | 0.581330891 | None | None | N |
L/R | 0.9842 | likely_pathogenic | 0.9778 | pathogenic | -2.319 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | D | 0.581330891 | None | None | N |
L/S | 0.9878 | likely_pathogenic | 0.9824 | pathogenic | -3.491 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
L/T | 0.9507 | likely_pathogenic | 0.9337 | pathogenic | -3.012 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
L/V | 0.225 | likely_benign | 0.2102 | benign | -1.456 | Destabilizing | 0.999 | D | 0.7 | prob.neutral | D | 0.550095904 | None | None | N |
L/W | 0.902 | likely_pathogenic | 0.8659 | pathogenic | -2.104 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
L/Y | 0.9426 | likely_pathogenic | 0.9255 | pathogenic | -1.864 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.