Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9177 | 27754;27755;27756 | chr2:178712393;178712392;178712391 | chr2:179577120;179577119;179577118 |
N2AB | 8860 | 26803;26804;26805 | chr2:178712393;178712392;178712391 | chr2:179577120;179577119;179577118 |
N2A | 7933 | 24022;24023;24024 | chr2:178712393;178712392;178712391 | chr2:179577120;179577119;179577118 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1296040087 | -0.495 | 0.722 | N | 0.433 | 0.172 | 0.299770980665 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
E/G | rs1296040087 | -0.495 | 0.722 | N | 0.433 | 0.172 | 0.299770980665 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/G | rs1296040087 | -0.495 | 0.722 | N | 0.433 | 0.172 | 0.299770980665 | gnomAD-4.0.0 | 6.5716E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4699E-05 | 0 | 0 |
E/K | None | None | 0.722 | N | 0.483 | 0.212 | 0.234412748748 | gnomAD-4.0.0 | 1.08029E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.18125E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1156 | likely_benign | 0.116 | benign | -0.455 | Destabilizing | 0.722 | D | 0.438 | neutral | N | 0.514758132 | None | None | N |
E/C | 0.8228 | likely_pathogenic | 0.7902 | pathogenic | -0.012 | Destabilizing | 0.996 | D | 0.589 | neutral | None | None | None | None | N |
E/D | 0.095 | likely_benign | 0.0955 | benign | -0.303 | Destabilizing | 0.003 | N | 0.137 | neutral | N | 0.460462287 | None | None | N |
E/F | 0.683 | likely_pathogenic | 0.6417 | pathogenic | -0.367 | Destabilizing | 0.987 | D | 0.521 | neutral | None | None | None | None | N |
E/G | 0.1306 | likely_benign | 0.1218 | benign | -0.644 | Destabilizing | 0.722 | D | 0.433 | neutral | N | 0.516990361 | None | None | N |
E/H | 0.4211 | ambiguous | 0.3771 | ambiguous | -0.129 | Destabilizing | 0.961 | D | 0.412 | neutral | None | None | None | None | N |
E/I | 0.3754 | ambiguous | 0.3447 | ambiguous | 0.01 | Stabilizing | 0.961 | D | 0.515 | neutral | None | None | None | None | N |
E/K | 0.1385 | likely_benign | 0.119 | benign | 0.291 | Stabilizing | 0.722 | D | 0.483 | neutral | N | 0.504599854 | None | None | N |
E/L | 0.3517 | ambiguous | 0.3271 | benign | 0.01 | Stabilizing | 0.961 | D | 0.439 | neutral | None | None | None | None | N |
E/M | 0.4266 | ambiguous | 0.3939 | ambiguous | 0.184 | Stabilizing | 0.996 | D | 0.487 | neutral | None | None | None | None | N |
E/N | 0.2133 | likely_benign | 0.1965 | benign | -0.015 | Destabilizing | 0.044 | N | 0.228 | neutral | None | None | None | None | N |
E/P | 0.6516 | likely_pathogenic | 0.62 | pathogenic | -0.125 | Destabilizing | 0.961 | D | 0.399 | neutral | None | None | None | None | N |
E/Q | 0.1433 | likely_benign | 0.1336 | benign | 0.024 | Stabilizing | 0.722 | D | 0.447 | neutral | N | 0.460886809 | None | None | N |
E/R | 0.2242 | likely_benign | 0.1968 | benign | 0.481 | Stabilizing | 0.961 | D | 0.404 | neutral | None | None | None | None | N |
E/S | 0.1645 | likely_benign | 0.1541 | benign | -0.183 | Destabilizing | 0.633 | D | 0.458 | neutral | None | None | None | None | N |
E/T | 0.1951 | likely_benign | 0.1799 | benign | -0.025 | Destabilizing | 0.775 | D | 0.439 | neutral | None | None | None | None | N |
E/V | 0.2301 | likely_benign | 0.2137 | benign | -0.125 | Destabilizing | 0.949 | D | 0.405 | neutral | N | 0.482398105 | None | None | N |
E/W | 0.8086 | likely_pathogenic | 0.7694 | pathogenic | -0.219 | Destabilizing | 0.996 | D | 0.657 | neutral | None | None | None | None | N |
E/Y | 0.5474 | ambiguous | 0.5063 | ambiguous | -0.13 | Destabilizing | 0.987 | D | 0.487 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.