Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9178 | 27757;27758;27759 | chr2:178712390;178712389;178712388 | chr2:179577117;179577116;179577115 |
N2AB | 8861 | 26806;26807;26808 | chr2:178712390;178712389;178712388 | chr2:179577117;179577116;179577115 |
N2A | 7934 | 24025;24026;24027 | chr2:178712390;178712389;178712388 | chr2:179577117;179577116;179577115 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs747327863 | -0.475 | 0.826 | D | 0.677 | 0.772 | 0.596650592983 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 0 |
D/G | rs747327863 | -0.475 | 0.826 | D | 0.677 | 0.772 | 0.596650592983 | gnomAD-4.0.0 | 6.36472E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.14318E-05 | 0 | 0 |
D/V | None | None | 0.92 | D | 0.766 | 0.782 | 0.782820974753 | gnomAD-4.0.0 | 1.59118E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85796E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.8767 | likely_pathogenic | 0.821 | pathogenic | -0.14 | Destabilizing | 0.061 | N | 0.476 | neutral | D | 0.573062271 | None | None | N |
D/C | 0.9759 | likely_pathogenic | 0.9673 | pathogenic | 0.025 | Stabilizing | 0.999 | D | 0.826 | deleterious | None | None | None | None | N |
D/E | 0.7999 | likely_pathogenic | 0.7313 | pathogenic | -0.688 | Destabilizing | 0.826 | D | 0.614 | neutral | D | 0.601104192 | None | None | N |
D/F | 0.9745 | likely_pathogenic | 0.9586 | pathogenic | 0.511 | Stabilizing | 0.997 | D | 0.83 | deleterious | None | None | None | None | N |
D/G | 0.9158 | likely_pathogenic | 0.8701 | pathogenic | -0.575 | Destabilizing | 0.826 | D | 0.677 | prob.neutral | D | 0.639663166 | None | None | N |
D/H | 0.9066 | likely_pathogenic | 0.8556 | pathogenic | 0.19 | Stabilizing | 0.999 | D | 0.785 | deleterious | D | 0.593199875 | None | None | N |
D/I | 0.9667 | likely_pathogenic | 0.9428 | pathogenic | 1.031 | Stabilizing | 0.982 | D | 0.815 | deleterious | None | None | None | None | N |
D/K | 0.9834 | likely_pathogenic | 0.9704 | pathogenic | -0.012 | Destabilizing | 0.939 | D | 0.711 | prob.delet. | None | None | None | None | N |
D/L | 0.9671 | likely_pathogenic | 0.9427 | pathogenic | 1.031 | Stabilizing | 0.939 | D | 0.765 | deleterious | None | None | None | None | N |
D/M | 0.9733 | likely_pathogenic | 0.9586 | pathogenic | 1.482 | Stabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
D/N | 0.7011 | likely_pathogenic | 0.6128 | pathogenic | -0.805 | Destabilizing | 0.92 | D | 0.656 | neutral | D | 0.596289455 | None | None | N |
D/P | 0.9982 | likely_pathogenic | 0.9964 | pathogenic | 0.669 | Stabilizing | 0.991 | D | 0.785 | deleterious | None | None | None | None | N |
D/Q | 0.9694 | likely_pathogenic | 0.9505 | pathogenic | -0.531 | Destabilizing | 0.991 | D | 0.721 | prob.delet. | None | None | None | None | N |
D/R | 0.9891 | likely_pathogenic | 0.9802 | pathogenic | 0.083 | Stabilizing | 0.991 | D | 0.806 | deleterious | None | None | None | None | N |
D/S | 0.8684 | likely_pathogenic | 0.8033 | pathogenic | -1.059 | Destabilizing | 0.373 | N | 0.359 | neutral | None | None | None | None | N |
D/T | 0.9467 | likely_pathogenic | 0.9115 | pathogenic | -0.663 | Destabilizing | 0.17 | N | 0.492 | neutral | None | None | None | None | N |
D/V | 0.9139 | likely_pathogenic | 0.8674 | pathogenic | 0.669 | Stabilizing | 0.92 | D | 0.766 | deleterious | D | 0.6563183 | None | None | N |
D/W | 0.9953 | likely_pathogenic | 0.9924 | pathogenic | 0.68 | Stabilizing | 0.999 | D | 0.826 | deleterious | None | None | None | None | N |
D/Y | 0.842 | likely_pathogenic | 0.7676 | pathogenic | 0.795 | Stabilizing | 0.996 | D | 0.819 | deleterious | D | 0.630578384 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.