Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9180 | 27763;27764;27765 | chr2:178712384;178712383;178712382 | chr2:179577111;179577110;179577109 |
N2AB | 8863 | 26812;26813;26814 | chr2:178712384;178712383;178712382 | chr2:179577111;179577110;179577109 |
N2A | 7936 | 24031;24032;24033 | chr2:178712384;178712383;178712382 | chr2:179577111;179577110;179577109 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | None | None | 1.0 | D | 0.855 | 0.805 | 0.820832588438 | gnomAD-4.0.0 | 1.59121E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02371E-05 |
G/R | rs1435275543 | None | 1.0 | D | 0.861 | 0.765 | 0.877214000256 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
G/R | rs1435275543 | None | 1.0 | D | 0.861 | 0.765 | 0.877214000256 | gnomAD-4.0.0 | 6.57419E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47007E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2582 | likely_benign | 0.2385 | benign | -0.833 | Destabilizing | 0.999 | D | 0.805 | deleterious | D | 0.590488928 | None | None | N |
G/C | 0.7089 | likely_pathogenic | 0.6468 | pathogenic | -0.95 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
G/D | 0.7946 | likely_pathogenic | 0.7458 | pathogenic | -1.686 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
G/E | 0.856 | likely_pathogenic | 0.809 | pathogenic | -1.702 | Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.612351689 | None | None | N |
G/F | 0.9554 | likely_pathogenic | 0.9359 | pathogenic | -1.098 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
G/H | 0.9451 | likely_pathogenic | 0.9202 | pathogenic | -1.633 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
G/I | 0.9418 | likely_pathogenic | 0.9173 | pathogenic | -0.301 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
G/K | 0.9599 | likely_pathogenic | 0.9357 | pathogenic | -1.452 | Destabilizing | 0.991 | D | 0.729 | prob.delet. | None | None | None | None | N |
G/L | 0.912 | likely_pathogenic | 0.8726 | pathogenic | -0.301 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
G/M | 0.9349 | likely_pathogenic | 0.91 | pathogenic | -0.191 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
G/N | 0.8499 | likely_pathogenic | 0.811 | pathogenic | -1.202 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
G/P | 0.9961 | likely_pathogenic | 0.9935 | pathogenic | -0.436 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
G/Q | 0.8712 | likely_pathogenic | 0.8268 | pathogenic | -1.334 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
G/R | 0.885 | likely_pathogenic | 0.8292 | pathogenic | -1.162 | Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.641402631 | None | None | N |
G/S | 0.2515 | likely_benign | 0.2143 | benign | -1.435 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
G/T | 0.7585 | likely_pathogenic | 0.7 | pathogenic | -1.373 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
G/V | 0.8653 | likely_pathogenic | 0.8201 | pathogenic | -0.436 | Destabilizing | 1.0 | D | 0.847 | deleterious | D | 0.657623796 | None | None | N |
G/W | 0.9492 | likely_pathogenic | 0.9294 | pathogenic | -1.585 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
G/Y | 0.9461 | likely_pathogenic | 0.9219 | pathogenic | -1.134 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.