Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9189 | 27790;27791;27792 | chr2:178712357;178712356;178712355 | chr2:179577084;179577083;179577082 |
N2AB | 8872 | 26839;26840;26841 | chr2:178712357;178712356;178712355 | chr2:179577084;179577083;179577082 |
N2A | 7945 | 24058;24059;24060 | chr2:178712357;178712356;178712355 | chr2:179577084;179577083;179577082 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | None | N | 0.195 | 0.075 | 0.301455362545 | gnomAD-4.0.0 | 6.84231E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99468E-07 | 0 | 0 |
A/V | None | None | 0.062 | N | 0.219 | 0.111 | None | gnomAD-4.0.0 | 8.21078E-06 | None | None | None | None | I | None | 2.98829E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99468E-06 | 0 | 1.65651E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5131 | ambiguous | 0.4748 | ambiguous | -0.953 | Destabilizing | 0.824 | D | 0.26 | neutral | None | None | None | None | I |
A/D | 0.1038 | likely_benign | 0.1064 | benign | -0.543 | Destabilizing | None | N | 0.193 | neutral | N | 0.430567108 | None | None | I |
A/E | 0.12 | likely_benign | 0.1221 | benign | -0.684 | Destabilizing | 0.081 | N | 0.263 | neutral | None | None | None | None | I |
A/F | 0.234 | likely_benign | 0.2154 | benign | -0.966 | Destabilizing | 0.555 | D | 0.41 | neutral | None | None | None | None | I |
A/G | 0.1259 | likely_benign | 0.1184 | benign | -0.314 | Destabilizing | None | N | 0.195 | neutral | N | 0.44151482 | None | None | I |
A/H | 0.3125 | likely_benign | 0.2927 | benign | -0.242 | Destabilizing | 0.935 | D | 0.402 | neutral | None | None | None | None | I |
A/I | 0.1472 | likely_benign | 0.1319 | benign | -0.519 | Destabilizing | 0.235 | N | 0.281 | neutral | None | None | None | None | I |
A/K | 0.2462 | likely_benign | 0.2417 | benign | -0.559 | Destabilizing | 0.149 | N | 0.26 | neutral | None | None | None | None | I |
A/L | 0.1319 | likely_benign | 0.1206 | benign | -0.519 | Destabilizing | 0.081 | N | 0.289 | neutral | None | None | None | None | I |
A/M | 0.1782 | likely_benign | 0.1581 | benign | -0.654 | Destabilizing | 0.824 | D | 0.304 | neutral | None | None | None | None | I |
A/N | 0.1391 | likely_benign | 0.1285 | benign | -0.323 | Destabilizing | 0.081 | N | 0.357 | neutral | None | None | None | None | I |
A/P | 0.1443 | likely_benign | 0.1253 | benign | -0.431 | Destabilizing | 0.484 | N | 0.273 | neutral | N | 0.479763777 | None | None | I |
A/Q | 0.2166 | likely_benign | 0.2016 | benign | -0.565 | Destabilizing | 0.555 | D | 0.281 | neutral | None | None | None | None | I |
A/R | 0.2527 | likely_benign | 0.2422 | benign | -0.14 | Destabilizing | 0.38 | N | 0.284 | neutral | None | None | None | None | I |
A/S | 0.0829 | likely_benign | 0.0792 | benign | -0.528 | Destabilizing | 0.027 | N | 0.329 | neutral | N | 0.460500439 | None | None | I |
A/T | 0.074 | likely_benign | 0.0711 | benign | -0.597 | Destabilizing | None | N | 0.326 | neutral | N | 0.50033105 | None | None | I |
A/V | 0.0937 | likely_benign | 0.089 | benign | -0.431 | Destabilizing | 0.062 | N | 0.219 | neutral | N | 0.495367948 | None | None | I |
A/W | 0.6194 | likely_pathogenic | 0.5751 | pathogenic | -1.034 | Destabilizing | 0.935 | D | 0.545 | neutral | None | None | None | None | I |
A/Y | 0.3249 | likely_benign | 0.3077 | benign | -0.751 | Destabilizing | 0.555 | D | 0.41 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.