Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9192 | 27799;27800;27801 | chr2:178712348;178712347;178712346 | chr2:179577075;179577074;179577073 |
N2AB | 8875 | 26848;26849;26850 | chr2:178712348;178712347;178712346 | chr2:179577075;179577074;179577073 |
N2A | 7948 | 24067;24068;24069 | chr2:178712348;178712347;178712346 | chr2:179577075;179577074;179577073 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.001 | N | 0.229 | 0.083 | 0.230578612272 | gnomAD-4.0.0 | 4.7742E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.5754E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2228 | likely_benign | 0.2388 | benign | 0.001 | Stabilizing | 0.388 | N | 0.459 | neutral | None | None | None | None | I |
K/C | 0.6141 | likely_pathogenic | 0.6079 | pathogenic | -0.155 | Destabilizing | 0.981 | D | 0.578 | neutral | None | None | None | None | I |
K/D | 0.4532 | ambiguous | 0.4865 | ambiguous | 0.045 | Stabilizing | 0.241 | N | 0.529 | neutral | None | None | None | None | I |
K/E | 0.096 | likely_benign | 0.112 | benign | 0.046 | Stabilizing | 0.09 | N | 0.408 | neutral | N | 0.472144371 | None | None | I |
K/F | 0.567 | likely_pathogenic | 0.5942 | pathogenic | -0.215 | Destabilizing | 0.818 | D | 0.54 | neutral | None | None | None | None | I |
K/G | 0.3188 | likely_benign | 0.3282 | benign | -0.2 | Destabilizing | 0.388 | N | 0.535 | neutral | None | None | None | None | I |
K/H | 0.2427 | likely_benign | 0.2616 | benign | -0.501 | Destabilizing | 0.005 | N | 0.405 | neutral | None | None | None | None | I |
K/I | 0.2455 | likely_benign | 0.2644 | benign | 0.45 | Stabilizing | 0.773 | D | 0.539 | neutral | N | 0.520575823 | None | None | I |
K/L | 0.2749 | likely_benign | 0.2888 | benign | 0.45 | Stabilizing | 0.388 | N | 0.55 | neutral | None | None | None | None | I |
K/M | 0.1441 | likely_benign | 0.1576 | benign | 0.313 | Stabilizing | 0.944 | D | 0.515 | neutral | None | None | None | None | I |
K/N | 0.2637 | likely_benign | 0.2891 | benign | 0.296 | Stabilizing | 0.006 | N | 0.261 | neutral | N | 0.48244151 | None | None | I |
K/P | 0.8508 | likely_pathogenic | 0.8255 | pathogenic | 0.329 | Stabilizing | 0.818 | D | 0.518 | neutral | None | None | None | None | I |
K/Q | 0.0906 | likely_benign | 0.099 | benign | 0.074 | Stabilizing | 0.015 | N | 0.256 | neutral | N | 0.462834242 | None | None | I |
K/R | 0.0748 | likely_benign | 0.0751 | benign | 0.028 | Stabilizing | 0.001 | N | 0.229 | neutral | N | 0.453004037 | None | None | I |
K/S | 0.229 | likely_benign | 0.2536 | benign | -0.209 | Destabilizing | 0.388 | N | 0.405 | neutral | None | None | None | None | I |
K/T | 0.1054 | likely_benign | 0.1169 | benign | -0.062 | Destabilizing | 0.324 | N | 0.531 | neutral | N | 0.444211195 | None | None | I |
K/V | 0.2334 | likely_benign | 0.2503 | benign | 0.329 | Stabilizing | 0.69 | D | 0.527 | neutral | None | None | None | None | I |
K/W | 0.618 | likely_pathogenic | 0.6121 | pathogenic | -0.201 | Destabilizing | 0.981 | D | 0.613 | neutral | None | None | None | None | I |
K/Y | 0.4686 | ambiguous | 0.4885 | ambiguous | 0.155 | Stabilizing | 0.69 | D | 0.55 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.