Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9197 | 27814;27815;27816 | chr2:178712333;178712332;178712331 | chr2:179577060;179577059;179577058 |
N2AB | 8880 | 26863;26864;26865 | chr2:178712333;178712332;178712331 | chr2:179577060;179577059;179577058 |
N2A | 7953 | 24082;24083;24084 | chr2:178712333;178712332;178712331 | chr2:179577060;179577059;179577058 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1219833647 | -0.401 | 0.969 | N | 0.66 | 0.416 | 0.59544603514 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.56E-05 | None | 0 | None | 0 | 0 | 0 |
A/V | rs1219833647 | -0.401 | 0.969 | N | 0.66 | 0.416 | 0.59544603514 | gnomAD-4.0.0 | 1.36863E-06 | None | None | None | None | N | None | 2.98829E-05 | 0 | None | 0 | 2.51927E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6559 | likely_pathogenic | 0.6109 | pathogenic | -1.596 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
A/D | 0.9739 | likely_pathogenic | 0.9332 | pathogenic | -2.244 | Highly Destabilizing | 0.986 | D | 0.803 | deleterious | None | None | None | None | N |
A/E | 0.9648 | likely_pathogenic | 0.916 | pathogenic | -2.149 | Highly Destabilizing | 0.982 | D | 0.765 | deleterious | D | 0.544736625 | None | None | N |
A/F | 0.8924 | likely_pathogenic | 0.7828 | pathogenic | -1.083 | Destabilizing | 0.998 | D | 0.86 | deleterious | None | None | None | None | N |
A/G | 0.202 | likely_benign | 0.1606 | benign | -1.595 | Destabilizing | 0.046 | N | 0.319 | neutral | N | 0.493057206 | None | None | N |
A/H | 0.9702 | likely_pathogenic | 0.932 | pathogenic | -1.849 | Destabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | N |
A/I | 0.7151 | likely_pathogenic | 0.6209 | pathogenic | -0.226 | Destabilizing | 0.993 | D | 0.809 | deleterious | None | None | None | None | N |
A/K | 0.9872 | likely_pathogenic | 0.9672 | pathogenic | -1.47 | Destabilizing | 0.986 | D | 0.765 | deleterious | None | None | None | None | N |
A/L | 0.6827 | likely_pathogenic | 0.5579 | ambiguous | -0.226 | Destabilizing | 0.993 | D | 0.749 | deleterious | None | None | None | None | N |
A/M | 0.7208 | likely_pathogenic | 0.6046 | pathogenic | -0.428 | Destabilizing | 0.999 | D | 0.804 | deleterious | None | None | None | None | N |
A/N | 0.9186 | likely_pathogenic | 0.8315 | pathogenic | -1.571 | Destabilizing | 0.986 | D | 0.828 | deleterious | None | None | None | None | N |
A/P | 0.9807 | likely_pathogenic | 0.9546 | pathogenic | -0.509 | Destabilizing | 0.991 | D | 0.808 | deleterious | D | 0.544990114 | None | None | N |
A/Q | 0.9421 | likely_pathogenic | 0.8908 | pathogenic | -1.571 | Destabilizing | 0.993 | D | 0.811 | deleterious | None | None | None | None | N |
A/R | 0.9667 | likely_pathogenic | 0.9276 | pathogenic | -1.29 | Destabilizing | 0.993 | D | 0.808 | deleterious | None | None | None | None | N |
A/S | 0.1452 | likely_benign | 0.1196 | benign | -1.988 | Destabilizing | 0.58 | D | 0.377 | neutral | N | 0.501171054 | None | None | N |
A/T | 0.2108 | likely_benign | 0.1665 | benign | -1.775 | Destabilizing | 0.885 | D | 0.613 | neutral | D | 0.531792895 | None | None | N |
A/V | 0.381 | ambiguous | 0.3133 | benign | -0.509 | Destabilizing | 0.969 | D | 0.66 | neutral | N | 0.493823539 | None | None | N |
A/W | 0.9906 | likely_pathogenic | 0.9742 | pathogenic | -1.636 | Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | N |
A/Y | 0.9617 | likely_pathogenic | 0.9078 | pathogenic | -1.152 | Destabilizing | 0.998 | D | 0.861 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.