Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9199 | 27820;27821;27822 | chr2:178712327;178712326;178712325 | chr2:179577054;179577053;179577052 |
N2AB | 8882 | 26869;26870;26871 | chr2:178712327;178712326;178712325 | chr2:179577054;179577053;179577052 |
N2A | 7955 | 24088;24089;24090 | chr2:178712327;178712326;178712325 | chr2:179577054;179577053;179577052 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/K | rs1207087892 | None | 0.966 | N | 0.831 | 0.499 | 0.650812743361 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/K | rs1207087892 | None | 0.966 | N | 0.831 | 0.499 | 0.650812743361 | gnomAD-4.0.0 | 3.84476E-06 | None | None | None | None | N | None | 5.07511E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7669 | likely_pathogenic | 0.7681 | pathogenic | -2.536 | Highly Destabilizing | 0.525 | D | 0.691 | prob.neutral | None | None | None | None | N |
I/C | 0.8575 | likely_pathogenic | 0.8484 | pathogenic | -1.949 | Destabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | N |
I/D | 0.9887 | likely_pathogenic | 0.9843 | pathogenic | -2.785 | Highly Destabilizing | 0.991 | D | 0.838 | deleterious | None | None | None | None | N |
I/E | 0.9809 | likely_pathogenic | 0.9753 | pathogenic | -2.548 | Highly Destabilizing | 0.974 | D | 0.827 | deleterious | None | None | None | None | N |
I/F | 0.3267 | likely_benign | 0.2642 | benign | -1.524 | Destabilizing | 0.949 | D | 0.757 | deleterious | None | None | None | None | N |
I/G | 0.9451 | likely_pathogenic | 0.9349 | pathogenic | -3.106 | Highly Destabilizing | 0.974 | D | 0.83 | deleterious | None | None | None | None | N |
I/H | 0.9585 | likely_pathogenic | 0.9416 | pathogenic | -2.596 | Highly Destabilizing | 0.998 | D | 0.822 | deleterious | None | None | None | None | N |
I/K | 0.9682 | likely_pathogenic | 0.9562 | pathogenic | -1.974 | Destabilizing | 0.966 | D | 0.831 | deleterious | N | 0.468849299 | None | None | N |
I/L | 0.1435 | likely_benign | 0.1343 | benign | -0.889 | Destabilizing | 0.005 | N | 0.253 | neutral | N | 0.355275396 | None | None | N |
I/M | 0.1893 | likely_benign | 0.1768 | benign | -0.913 | Destabilizing | 0.934 | D | 0.701 | prob.neutral | N | 0.456567941 | None | None | N |
I/N | 0.8591 | likely_pathogenic | 0.8268 | pathogenic | -2.336 | Highly Destabilizing | 0.991 | D | 0.839 | deleterious | None | None | None | None | N |
I/P | 0.9807 | likely_pathogenic | 0.97 | pathogenic | -1.418 | Destabilizing | 0.991 | D | 0.841 | deleterious | None | None | None | None | N |
I/Q | 0.9628 | likely_pathogenic | 0.9512 | pathogenic | -2.172 | Highly Destabilizing | 0.991 | D | 0.833 | deleterious | None | None | None | None | N |
I/R | 0.9521 | likely_pathogenic | 0.9333 | pathogenic | -1.73 | Destabilizing | 0.966 | D | 0.842 | deleterious | N | 0.480205605 | None | None | N |
I/S | 0.846 | likely_pathogenic | 0.8291 | pathogenic | -3.067 | Highly Destabilizing | 0.974 | D | 0.815 | deleterious | None | None | None | None | N |
I/T | 0.7747 | likely_pathogenic | 0.7676 | pathogenic | -2.673 | Highly Destabilizing | 0.801 | D | 0.73 | prob.delet. | N | 0.480205605 | None | None | N |
I/V | 0.0911 | likely_benign | 0.0923 | benign | -1.418 | Destabilizing | 0.002 | N | 0.246 | neutral | N | 0.3661224 | None | None | N |
I/W | 0.9678 | likely_pathogenic | 0.9497 | pathogenic | -1.921 | Destabilizing | 0.998 | D | 0.828 | deleterious | None | None | None | None | N |
I/Y | 0.8231 | likely_pathogenic | 0.7741 | pathogenic | -1.621 | Destabilizing | 0.974 | D | 0.803 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.