Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9200 | 27823;27824;27825 | chr2:178712324;178712323;178712322 | chr2:179577051;179577050;179577049 |
N2AB | 8883 | 26872;26873;26874 | chr2:178712324;178712323;178712322 | chr2:179577051;179577050;179577049 |
N2A | 7956 | 24091;24092;24093 | chr2:178712324;178712323;178712322 | chr2:179577051;179577050;179577049 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.966 | N | 0.329 | 0.148 | 0.321951552304 | gnomAD-4.0.0 | 1.5923E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43353E-05 | 0 |
L/P | rs776598104 | None | 0.966 | N | 0.368 | 0.315 | 0.495506531988 | gnomAD-4.0.0 | 1.36927E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80009E-06 | 0 | 0 |
L/R | rs776598104 | 0.177 | 0.876 | N | 0.346 | 0.272 | 0.430126000877 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.55E-05 | None | 0 | 0 | 0 |
L/R | rs776598104 | 0.177 | 0.876 | N | 0.346 | 0.272 | 0.430126000877 | gnomAD-4.0.0 | 2.0539E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73491E-04 | 0 | 2.32024E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.0982 | likely_benign | 0.1015 | benign | -0.958 | Destabilizing | 0.525 | D | 0.269 | neutral | None | None | None | None | N |
L/C | 0.2576 | likely_benign | 0.2682 | benign | -0.739 | Destabilizing | 0.998 | D | 0.317 | neutral | None | None | None | None | N |
L/D | 0.2567 | likely_benign | 0.2601 | benign | -0.139 | Destabilizing | 0.842 | D | 0.348 | neutral | None | None | None | None | N |
L/E | 0.1534 | likely_benign | 0.1493 | benign | -0.174 | Destabilizing | 0.728 | D | 0.327 | neutral | None | None | None | None | N |
L/F | 0.0651 | likely_benign | 0.0683 | benign | -0.628 | Destabilizing | 0.966 | D | 0.329 | neutral | N | 0.455304397 | None | None | N |
L/G | 0.2477 | likely_benign | 0.2578 | benign | -1.202 | Destabilizing | 0.728 | D | 0.315 | neutral | None | None | None | None | N |
L/H | 0.0817 | likely_benign | 0.0845 | benign | -0.33 | Destabilizing | 0.991 | D | 0.357 | neutral | N | 0.477391823 | None | None | N |
L/I | 0.0589 | likely_benign | 0.0612 | benign | -0.406 | Destabilizing | 0.801 | D | 0.225 | neutral | N | 0.441065663 | None | None | N |
L/K | 0.1205 | likely_benign | 0.1197 | benign | -0.567 | Destabilizing | 0.728 | D | 0.303 | neutral | None | None | None | None | N |
L/M | 0.0719 | likely_benign | 0.0767 | benign | -0.461 | Destabilizing | 0.974 | D | 0.371 | neutral | None | None | None | None | N |
L/N | 0.1219 | likely_benign | 0.1229 | benign | -0.445 | Destabilizing | 0.842 | D | 0.346 | neutral | None | None | None | None | N |
L/P | 0.689 | likely_pathogenic | 0.6189 | pathogenic | -0.556 | Destabilizing | 0.966 | D | 0.368 | neutral | N | 0.461047712 | None | None | N |
L/Q | 0.0715 | likely_benign | 0.0697 | benign | -0.604 | Destabilizing | 0.142 | N | 0.249 | neutral | None | None | None | None | N |
L/R | 0.0932 | likely_benign | 0.0913 | benign | -0.023 | Destabilizing | 0.876 | D | 0.346 | neutral | N | 0.454514963 | None | None | N |
L/S | 0.0782 | likely_benign | 0.0807 | benign | -1.015 | Destabilizing | 0.029 | N | 0.203 | neutral | None | None | None | None | N |
L/T | 0.0722 | likely_benign | 0.0745 | benign | -0.934 | Destabilizing | 0.067 | N | 0.196 | neutral | None | None | None | None | N |
L/V | 0.0587 | likely_benign | 0.0608 | benign | -0.556 | Destabilizing | 0.454 | N | 0.233 | neutral | N | 0.410532112 | None | None | N |
L/W | 0.1282 | likely_benign | 0.1303 | benign | -0.658 | Destabilizing | 0.998 | D | 0.388 | neutral | None | None | None | None | N |
L/Y | 0.1361 | likely_benign | 0.1474 | benign | -0.424 | Destabilizing | 0.991 | D | 0.339 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.