Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9211 | 27856;27857;27858 | chr2:178712199;178712198;178712197 | chr2:179576926;179576925;179576924 |
N2AB | 8894 | 26905;26906;26907 | chr2:178712199;178712198;178712197 | chr2:179576926;179576925;179576924 |
N2A | 7967 | 24124;24125;24126 | chr2:178712199;178712198;178712197 | chr2:179576926;179576925;179576924 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1197586368 | None | 0.864 | N | 0.622 | 0.283 | 0.346315397577 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5471 | ambiguous | 0.5581 | ambiguous | -2.174 | Highly Destabilizing | 0.547 | D | 0.535 | neutral | None | None | None | None | I |
L/C | 0.8407 | likely_pathogenic | 0.8501 | pathogenic | -1.433 | Destabilizing | 0.995 | D | 0.71 | prob.delet. | None | None | None | None | I |
L/D | 0.9792 | likely_pathogenic | 0.9802 | pathogenic | -1.954 | Destabilizing | 0.945 | D | 0.811 | deleterious | None | None | None | None | I |
L/E | 0.8977 | likely_pathogenic | 0.8948 | pathogenic | -1.801 | Destabilizing | 0.945 | D | 0.795 | deleterious | None | None | None | None | I |
L/F | 0.4233 | ambiguous | 0.4796 | ambiguous | -1.274 | Destabilizing | 0.864 | D | 0.622 | neutral | N | 0.497793335 | None | None | I |
L/G | 0.8718 | likely_pathogenic | 0.8751 | pathogenic | -2.662 | Highly Destabilizing | 0.945 | D | 0.785 | deleterious | None | None | None | None | I |
L/H | 0.8643 | likely_pathogenic | 0.8762 | pathogenic | -2.035 | Highly Destabilizing | 0.995 | D | 0.785 | deleterious | None | None | None | None | I |
L/I | 0.1549 | likely_benign | 0.1498 | benign | -0.809 | Destabilizing | 0.547 | D | 0.504 | neutral | None | None | None | None | I |
L/K | 0.8771 | likely_pathogenic | 0.8787 | pathogenic | -1.442 | Destabilizing | 0.894 | D | 0.721 | prob.delet. | None | None | None | None | I |
L/M | 0.1357 | likely_benign | 0.1471 | benign | -0.751 | Destabilizing | 0.053 | N | 0.351 | neutral | N | 0.473359204 | None | None | I |
L/N | 0.9119 | likely_pathogenic | 0.9151 | pathogenic | -1.526 | Destabilizing | 0.945 | D | 0.816 | deleterious | None | None | None | None | I |
L/P | 0.321 | likely_benign | 0.342 | ambiguous | -1.239 | Destabilizing | 0.017 | N | 0.485 | neutral | None | None | None | None | I |
L/Q | 0.7079 | likely_pathogenic | 0.7161 | pathogenic | -1.5 | Destabilizing | 0.894 | D | 0.775 | deleterious | None | None | None | None | I |
L/R | 0.8249 | likely_pathogenic | 0.8303 | pathogenic | -1.118 | Destabilizing | 0.894 | D | 0.774 | deleterious | None | None | None | None | I |
L/S | 0.8268 | likely_pathogenic | 0.8354 | pathogenic | -2.266 | Highly Destabilizing | 0.864 | D | 0.709 | prob.delet. | N | 0.470067522 | None | None | I |
L/T | 0.5501 | ambiguous | 0.5697 | pathogenic | -1.975 | Destabilizing | 0.894 | D | 0.7 | prob.neutral | None | None | None | None | I |
L/V | 0.1663 | likely_benign | 0.1629 | benign | -1.239 | Destabilizing | 0.477 | N | 0.461 | neutral | N | 0.479182101 | None | None | I |
L/W | 0.7312 | likely_pathogenic | 0.7607 | pathogenic | -1.549 | Destabilizing | 0.993 | D | 0.753 | deleterious | N | 0.503833723 | None | None | I |
L/Y | 0.8885 | likely_pathogenic | 0.9033 | pathogenic | -1.267 | Destabilizing | 0.945 | D | 0.752 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.