Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9212 | 27859;27860;27861 | chr2:178712196;178712195;178712194 | chr2:179576923;179576922;179576921 |
N2AB | 8895 | 26908;26909;26910 | chr2:178712196;178712195;178712194 | chr2:179576923;179576922;179576921 |
N2A | 7968 | 24127;24128;24129 | chr2:178712196;178712195;178712194 | chr2:179576923;179576922;179576921 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs769421279 | 0.297 | 0.822 | N | 0.439 | 0.303 | 0.366466682447 | gnomAD-2.1.1 | 7.15E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.57E-05 | 0 |
E/K | rs769421279 | 0.297 | 0.822 | N | 0.439 | 0.303 | 0.366466682447 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs769421279 | 0.297 | 0.822 | N | 0.439 | 0.303 | 0.366466682447 | gnomAD-4.0.0 | 3.84493E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.18195E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1345 | likely_benign | 0.1476 | benign | -0.247 | Destabilizing | 0.014 | N | 0.292 | neutral | N | 0.485225484 | None | None | I |
E/C | 0.808 | likely_pathogenic | 0.8494 | pathogenic | -0.214 | Destabilizing | 0.994 | D | 0.619 | neutral | None | None | None | None | I |
E/D | 0.1223 | likely_benign | 0.1364 | benign | -0.33 | Destabilizing | 0.014 | N | 0.295 | neutral | N | 0.516031221 | None | None | I |
E/F | 0.6537 | likely_pathogenic | 0.7102 | pathogenic | -0.05 | Destabilizing | 0.978 | D | 0.628 | neutral | None | None | None | None | I |
E/G | 0.1353 | likely_benign | 0.1553 | benign | -0.445 | Destabilizing | 0.698 | D | 0.479 | neutral | N | 0.485251937 | None | None | I |
E/H | 0.3807 | ambiguous | 0.4305 | ambiguous | 0.331 | Stabilizing | 0.998 | D | 0.453 | neutral | None | None | None | None | I |
E/I | 0.2864 | likely_benign | 0.3292 | benign | 0.24 | Stabilizing | 0.956 | D | 0.628 | neutral | None | None | None | None | I |
E/K | 0.124 | likely_benign | 0.1438 | benign | 0.262 | Stabilizing | 0.822 | D | 0.439 | neutral | N | 0.5061768 | None | None | I |
E/L | 0.2631 | likely_benign | 0.3056 | benign | 0.24 | Stabilizing | 0.915 | D | 0.563 | neutral | None | None | None | None | I |
E/M | 0.3792 | ambiguous | 0.4222 | ambiguous | 0.11 | Stabilizing | 0.998 | D | 0.549 | neutral | None | None | None | None | I |
E/N | 0.2174 | likely_benign | 0.256 | benign | -0.079 | Destabilizing | 0.956 | D | 0.431 | neutral | None | None | None | None | I |
E/P | 0.5189 | ambiguous | 0.5912 | pathogenic | 0.098 | Stabilizing | 0.978 | D | 0.519 | neutral | None | None | None | None | I |
E/Q | 0.103 | likely_benign | 0.11 | benign | -0.032 | Destabilizing | 0.971 | D | 0.431 | neutral | N | 0.509507894 | None | None | I |
E/R | 0.2308 | likely_benign | 0.2611 | benign | 0.569 | Stabilizing | 0.956 | D | 0.464 | neutral | None | None | None | None | I |
E/S | 0.1726 | likely_benign | 0.1946 | benign | -0.242 | Destabilizing | 0.754 | D | 0.401 | neutral | None | None | None | None | I |
E/T | 0.1926 | likely_benign | 0.2139 | benign | -0.079 | Destabilizing | 0.86 | D | 0.464 | neutral | None | None | None | None | I |
E/V | 0.1672 | likely_benign | 0.1856 | benign | 0.098 | Stabilizing | 0.89 | D | 0.469 | neutral | N | 0.489113051 | None | None | I |
E/W | 0.8644 | likely_pathogenic | 0.8927 | pathogenic | 0.095 | Stabilizing | 0.998 | D | 0.633 | neutral | None | None | None | None | I |
E/Y | 0.5177 | ambiguous | 0.5774 | pathogenic | 0.192 | Stabilizing | 0.993 | D | 0.57 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.