Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9214 | 27865;27866;27867 | chr2:178712190;178712189;178712188 | chr2:179576917;179576916;179576915 |
N2AB | 8897 | 26914;26915;26916 | chr2:178712190;178712189;178712188 | chr2:179576917;179576916;179576915 |
N2A | 7970 | 24133;24134;24135 | chr2:178712190;178712189;178712188 | chr2:179576917;179576916;179576915 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs987421243 | -0.025 | 0.489 | N | 0.419 | 0.114 | 0.319686207203 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 1.14837E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | rs987421243 | -0.025 | 0.489 | N | 0.419 | 0.114 | 0.319686207203 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs987421243 | -0.025 | 0.489 | N | 0.419 | 0.114 | 0.319686207203 | gnomAD-4.0.0 | 6.57462E-06 | None | None | None | None | I | None | 2.41266E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1564 | likely_benign | 0.1932 | benign | -1.075 | Destabilizing | 0.822 | D | 0.374 | neutral | N | 0.513033776 | None | None | I |
V/C | 0.7312 | likely_pathogenic | 0.781 | pathogenic | -0.677 | Destabilizing | 0.998 | D | 0.373 | neutral | None | None | None | None | I |
V/D | 0.4598 | ambiguous | 0.4972 | ambiguous | -0.856 | Destabilizing | 0.99 | D | 0.517 | neutral | N | 0.518518522 | None | None | I |
V/E | 0.2613 | likely_benign | 0.2757 | benign | -0.889 | Destabilizing | 0.978 | D | 0.443 | neutral | None | None | None | None | I |
V/F | 0.1683 | likely_benign | 0.1813 | benign | -0.882 | Destabilizing | 0.942 | D | 0.329 | neutral | N | 0.496108626 | None | None | I |
V/G | 0.2446 | likely_benign | 0.2855 | benign | -1.347 | Destabilizing | 0.97 | D | 0.488 | neutral | N | 0.503932986 | None | None | I |
V/H | 0.5638 | ambiguous | 0.5932 | pathogenic | -0.985 | Destabilizing | 0.998 | D | 0.545 | neutral | None | None | None | None | I |
V/I | 0.0737 | likely_benign | 0.0771 | benign | -0.452 | Destabilizing | 0.489 | N | 0.419 | neutral | N | 0.488098046 | None | None | I |
V/K | 0.287 | likely_benign | 0.2988 | benign | -0.991 | Destabilizing | 0.978 | D | 0.401 | neutral | None | None | None | None | I |
V/L | 0.1334 | likely_benign | 0.1452 | benign | -0.452 | Destabilizing | 0.014 | N | 0.163 | neutral | N | 0.456236343 | None | None | I |
V/M | 0.099 | likely_benign | 0.1083 | benign | -0.359 | Destabilizing | 0.356 | N | 0.211 | neutral | None | None | None | None | I |
V/N | 0.3391 | likely_benign | 0.3904 | ambiguous | -0.697 | Destabilizing | 0.993 | D | 0.529 | neutral | None | None | None | None | I |
V/P | 0.8464 | likely_pathogenic | 0.8845 | pathogenic | -0.624 | Destabilizing | 0.993 | D | 0.437 | neutral | None | None | None | None | I |
V/Q | 0.2449 | likely_benign | 0.2608 | benign | -0.87 | Destabilizing | 0.978 | D | 0.44 | neutral | None | None | None | None | I |
V/R | 0.2679 | likely_benign | 0.2808 | benign | -0.508 | Destabilizing | 0.978 | D | 0.518 | neutral | None | None | None | None | I |
V/S | 0.234 | likely_benign | 0.2889 | benign | -1.139 | Destabilizing | 0.978 | D | 0.375 | neutral | None | None | None | None | I |
V/T | 0.169 | likely_benign | 0.1965 | benign | -1.066 | Destabilizing | 0.86 | D | 0.31 | neutral | None | None | None | None | I |
V/W | 0.7774 | likely_pathogenic | 0.7955 | pathogenic | -1.07 | Destabilizing | 0.998 | D | 0.595 | neutral | None | None | None | None | I |
V/Y | 0.5477 | ambiguous | 0.5926 | pathogenic | -0.771 | Destabilizing | 0.978 | D | 0.323 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.