Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9219 | 27880;27881;27882 | chr2:178712175;178712174;178712173 | chr2:179576902;179576901;179576900 |
N2AB | 8902 | 26929;26930;26931 | chr2:178712175;178712174;178712173 | chr2:179576902;179576901;179576900 |
N2A | 7975 | 24148;24149;24150 | chr2:178712175;178712174;178712173 | chr2:179576902;179576901;179576900 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 1.0 | D | 0.904 | 0.876 | 0.899920238737 | gnomAD-4.0.0 | 1.59135E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85843E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4333 | ambiguous | 0.5946 | pathogenic | -0.292 | Destabilizing | 1.0 | D | 0.794 | deleterious | D | 0.620343497 | None | None | I |
G/C | 0.621 | likely_pathogenic | 0.7997 | pathogenic | -0.899 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
G/D | 0.5337 | ambiguous | 0.6858 | pathogenic | -0.347 | Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | I |
G/E | 0.5504 | ambiguous | 0.7005 | pathogenic | -0.505 | Destabilizing | 1.0 | D | 0.886 | deleterious | D | 0.591999768 | None | None | I |
G/F | 0.8694 | likely_pathogenic | 0.928 | pathogenic | -0.985 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | I |
G/H | 0.695 | likely_pathogenic | 0.8185 | pathogenic | -0.516 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | I |
G/I | 0.8868 | likely_pathogenic | 0.9529 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | I |
G/K | 0.636 | likely_pathogenic | 0.765 | pathogenic | -0.69 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | I |
G/L | 0.8064 | likely_pathogenic | 0.8893 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | I |
G/M | 0.8443 | likely_pathogenic | 0.9203 | pathogenic | -0.428 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | I |
G/N | 0.5115 | ambiguous | 0.5969 | pathogenic | -0.386 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
G/P | 0.9872 | likely_pathogenic | 0.9941 | pathogenic | -0.337 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | I |
G/Q | 0.5965 | likely_pathogenic | 0.7399 | pathogenic | -0.664 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | I |
G/R | 0.4869 | ambiguous | 0.6608 | pathogenic | -0.288 | Destabilizing | 1.0 | D | 0.904 | deleterious | D | 0.632385699 | None | None | I |
G/S | 0.2494 | likely_benign | 0.363 | ambiguous | -0.582 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
G/T | 0.5352 | ambiguous | 0.6787 | pathogenic | -0.664 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | I |
G/V | 0.7936 | likely_pathogenic | 0.9095 | pathogenic | -0.337 | Destabilizing | 1.0 | D | 0.868 | deleterious | D | 0.632587503 | None | None | I |
G/W | 0.7251 | likely_pathogenic | 0.8582 | pathogenic | -1.126 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | I |
G/Y | 0.7924 | likely_pathogenic | 0.8857 | pathogenic | -0.766 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.