Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9220 | 27883;27884;27885 | chr2:178712172;178712171;178712170 | chr2:179576899;179576898;179576897 |
N2AB | 8903 | 26932;26933;26934 | chr2:178712172;178712171;178712170 | chr2:179576899;179576898;179576897 |
N2A | 7976 | 24151;24152;24153 | chr2:178712172;178712171;178712170 | chr2:179576899;179576898;179576897 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs758435347 | 0.432 | 0.991 | N | 0.456 | 0.236 | 0.151104730317 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
D/N | rs758435347 | 0.432 | 0.991 | N | 0.456 | 0.236 | 0.151104730317 | gnomAD-4.0.0 | 4.78952E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29641E-06 | 0 | 0 |
D/V | None | None | 0.982 | N | 0.632 | 0.45 | 0.465721554213 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2018 | likely_benign | 0.2847 | benign | -0.387 | Destabilizing | 0.939 | D | 0.469 | neutral | N | 0.506253292 | None | None | I |
D/C | 0.7114 | likely_pathogenic | 0.7952 | pathogenic | 0.149 | Stabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | I |
D/E | 0.1781 | likely_benign | 0.1829 | benign | -0.311 | Destabilizing | 0.17 | N | 0.269 | neutral | N | 0.436003773 | None | None | I |
D/F | 0.5722 | likely_pathogenic | 0.6757 | pathogenic | -0.407 | Destabilizing | 0.973 | D | 0.638 | neutral | None | None | None | None | I |
D/G | 0.2287 | likely_benign | 0.3048 | benign | -0.58 | Destabilizing | 0.969 | D | 0.475 | neutral | N | 0.475853027 | None | None | I |
D/H | 0.3405 | ambiguous | 0.3923 | ambiguous | -0.36 | Destabilizing | 0.982 | D | 0.482 | neutral | N | 0.458138104 | None | None | I |
D/I | 0.4231 | ambiguous | 0.546 | ambiguous | 0.072 | Stabilizing | 0.986 | D | 0.645 | neutral | None | None | None | None | I |
D/K | 0.397 | ambiguous | 0.3831 | ambiguous | 0.404 | Stabilizing | 0.986 | D | 0.451 | neutral | None | None | None | None | I |
D/L | 0.462 | ambiguous | 0.571 | pathogenic | 0.072 | Stabilizing | 0.973 | D | 0.63 | neutral | None | None | None | None | I |
D/M | 0.6297 | likely_pathogenic | 0.7054 | pathogenic | 0.345 | Stabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | I |
D/N | 0.1038 | likely_benign | 0.1223 | benign | 0.092 | Stabilizing | 0.991 | D | 0.456 | neutral | N | 0.508600164 | None | None | I |
D/P | 0.946 | likely_pathogenic | 0.9712 | pathogenic | -0.059 | Destabilizing | 0.998 | D | 0.48 | neutral | None | None | None | None | I |
D/Q | 0.3384 | likely_benign | 0.3415 | ambiguous | 0.111 | Stabilizing | 0.986 | D | 0.465 | neutral | None | None | None | None | I |
D/R | 0.4616 | ambiguous | 0.4978 | ambiguous | 0.46 | Stabilizing | 0.986 | D | 0.566 | neutral | None | None | None | None | I |
D/S | 0.1351 | likely_benign | 0.1677 | benign | -0.007 | Destabilizing | 0.953 | D | 0.44 | neutral | None | None | None | None | I |
D/T | 0.2996 | likely_benign | 0.3702 | ambiguous | 0.147 | Stabilizing | 0.993 | D | 0.457 | neutral | None | None | None | None | I |
D/V | 0.2569 | likely_benign | 0.3562 | ambiguous | -0.059 | Destabilizing | 0.982 | D | 0.632 | neutral | N | 0.478977837 | None | None | I |
D/W | 0.9219 | likely_pathogenic | 0.9468 | pathogenic | -0.273 | Destabilizing | 0.998 | D | 0.688 | prob.neutral | None | None | None | None | I |
D/Y | 0.2435 | likely_benign | 0.314 | benign | -0.165 | Destabilizing | 0.1 | N | 0.461 | neutral | N | 0.464405528 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.