Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9224 | 27895;27896;27897 | chr2:178712160;178712159;178712158 | chr2:179576887;179576886;179576885 |
N2AB | 8907 | 26944;26945;26946 | chr2:178712160;178712159;178712158 | chr2:179576887;179576886;179576885 |
N2A | 7980 | 24163;24164;24165 | chr2:178712160;178712159;178712158 | chr2:179576887;179576886;179576885 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | D | 0.837 | 0.807 | 0.910524498493 | gnomAD-4.0.0 | 1.59124E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41429E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9413 | likely_pathogenic | 0.9596 | pathogenic | -2.367 | Highly Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
L/C | 0.9102 | likely_pathogenic | 0.9385 | pathogenic | -1.607 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
L/D | 0.999 | likely_pathogenic | 0.9994 | pathogenic | -3.049 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
L/E | 0.9926 | likely_pathogenic | 0.9952 | pathogenic | -2.72 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
L/F | 0.1426 | likely_benign | 0.1499 | benign | -1.343 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
L/G | 0.9896 | likely_pathogenic | 0.9934 | pathogenic | -2.984 | Highly Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
L/H | 0.9512 | likely_pathogenic | 0.9675 | pathogenic | -2.744 | Highly Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
L/I | 0.1364 | likely_benign | 0.1612 | benign | -0.514 | Destabilizing | 0.999 | D | 0.657 | neutral | D | 0.553071135 | None | None | N |
L/K | 0.9844 | likely_pathogenic | 0.9889 | pathogenic | -1.68 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
L/M | 0.2235 | likely_benign | 0.2517 | benign | -0.741 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
L/N | 0.9933 | likely_pathogenic | 0.9953 | pathogenic | -2.38 | Highly Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
L/P | 0.9957 | likely_pathogenic | 0.9976 | pathogenic | -1.122 | Destabilizing | 1.0 | D | 0.837 | deleterious | D | 0.62357775 | None | None | N |
L/Q | 0.952 | likely_pathogenic | 0.9681 | pathogenic | -2.003 | Highly Destabilizing | 1.0 | D | 0.836 | deleterious | D | 0.639597111 | None | None | N |
L/R | 0.9646 | likely_pathogenic | 0.9767 | pathogenic | -1.904 | Destabilizing | 1.0 | D | 0.828 | deleterious | D | 0.639597111 | None | None | N |
L/S | 0.9821 | likely_pathogenic | 0.9886 | pathogenic | -2.95 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
L/T | 0.9592 | likely_pathogenic | 0.9709 | pathogenic | -2.446 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
L/V | 0.2234 | likely_benign | 0.2845 | benign | -1.122 | Destabilizing | 0.999 | D | 0.666 | neutral | D | 0.590297842 | None | None | N |
L/W | 0.7334 | likely_pathogenic | 0.8139 | pathogenic | -1.726 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
L/Y | 0.8191 | likely_pathogenic | 0.8475 | pathogenic | -1.467 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.