Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9225 | 27898;27899;27900 | chr2:178712157;178712156;178712155 | chr2:179576884;179576883;179576882 |
N2AB | 8908 | 26947;26948;26949 | chr2:178712157;178712156;178712155 | chr2:179576884;179576883;179576882 |
N2A | 7981 | 24166;24167;24168 | chr2:178712157;178712156;178712155 | chr2:179576884;179576883;179576882 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/P | None | None | 0.917 | N | 0.515 | 0.429 | 0.506128173473 | gnomAD-4.0.0 | 1.59124E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8583E-06 | 0 | 0 |
Q/R | rs2076750199 | None | 0.006 | N | 0.189 | 0.16 | 0.183819452728 | gnomAD-4.0.0 | 4.77371E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57491E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3419 | ambiguous | 0.3971 | ambiguous | -0.677 | Destabilizing | 0.495 | N | 0.432 | neutral | None | None | None | None | I |
Q/C | 0.7037 | likely_pathogenic | 0.8086 | pathogenic | -0.05 | Destabilizing | 0.995 | D | 0.528 | neutral | None | None | None | None | I |
Q/D | 0.5473 | ambiguous | 0.649 | pathogenic | -0.7 | Destabilizing | 0.329 | N | 0.359 | neutral | None | None | None | None | I |
Q/E | 0.0949 | likely_benign | 0.1158 | benign | -0.59 | Destabilizing | 0.01 | N | 0.185 | neutral | N | 0.442936185 | None | None | I |
Q/F | 0.7142 | likely_pathogenic | 0.7703 | pathogenic | -0.29 | Destabilizing | 0.893 | D | 0.531 | neutral | None | None | None | None | I |
Q/G | 0.4808 | ambiguous | 0.5722 | pathogenic | -1.054 | Destabilizing | 0.828 | D | 0.524 | neutral | None | None | None | None | I |
Q/H | 0.2457 | likely_benign | 0.3083 | benign | -0.903 | Destabilizing | 0.975 | D | 0.449 | neutral | N | 0.481169286 | None | None | I |
Q/I | 0.3803 | ambiguous | 0.453 | ambiguous | 0.295 | Stabilizing | 0.543 | D | 0.547 | neutral | None | None | None | None | I |
Q/K | 0.1322 | likely_benign | 0.164 | benign | -0.439 | Destabilizing | 0.01 | N | 0.199 | neutral | N | 0.449632871 | None | None | I |
Q/L | 0.1694 | likely_benign | 0.2375 | benign | 0.295 | Stabilizing | 0.002 | N | 0.373 | neutral | N | 0.515031144 | None | None | I |
Q/M | 0.4488 | ambiguous | 0.5108 | ambiguous | 0.712 | Stabilizing | 0.893 | D | 0.447 | neutral | None | None | None | None | I |
Q/N | 0.4169 | ambiguous | 0.476 | ambiguous | -0.987 | Destabilizing | 0.828 | D | 0.344 | neutral | None | None | None | None | I |
Q/P | 0.6797 | likely_pathogenic | 0.7764 | pathogenic | 0.003 | Stabilizing | 0.917 | D | 0.515 | neutral | N | 0.51089476 | None | None | I |
Q/R | 0.1374 | likely_benign | 0.186 | benign | -0.402 | Destabilizing | 0.006 | N | 0.189 | neutral | N | 0.486497748 | None | None | I |
Q/S | 0.3259 | likely_benign | 0.338 | benign | -1.08 | Destabilizing | 0.495 | N | 0.367 | neutral | None | None | None | None | I |
Q/T | 0.2243 | likely_benign | 0.2525 | benign | -0.772 | Destabilizing | 0.828 | D | 0.473 | neutral | None | None | None | None | I |
Q/V | 0.2732 | likely_benign | 0.3369 | benign | 0.003 | Stabilizing | 0.543 | D | 0.525 | neutral | None | None | None | None | I |
Q/W | 0.6161 | likely_pathogenic | 0.7717 | pathogenic | -0.173 | Destabilizing | 0.995 | D | 0.533 | neutral | None | None | None | None | I |
Q/Y | 0.5131 | ambiguous | 0.6167 | pathogenic | 0.047 | Stabilizing | 0.944 | D | 0.527 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.