Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9228 | 27907;27908;27909 | chr2:178712148;178712147;178712146 | chr2:179576875;179576874;179576873 |
N2AB | 8911 | 26956;26957;26958 | chr2:178712148;178712147;178712146 | chr2:179576875;179576874;179576873 |
N2A | 7984 | 24175;24176;24177 | chr2:178712148;178712147;178712146 | chr2:179576875;179576874;179576873 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs756143599 | -1.866 | 0.741 | N | 0.823 | 0.515 | 0.786464674917 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
L/P | rs756143599 | -1.866 | 0.741 | N | 0.823 | 0.515 | 0.786464674917 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/P | rs756143599 | -1.866 | 0.741 | N | 0.823 | 0.515 | 0.786464674917 | gnomAD-4.0.0 | 7.68628E-06 | None | None | None | None | N | None | 1.69073E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.19644E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6424 | likely_pathogenic | 0.7135 | pathogenic | -2.618 | Highly Destabilizing | 0.035 | N | 0.623 | neutral | None | None | None | None | N |
L/C | 0.8139 | likely_pathogenic | 0.8556 | pathogenic | -1.462 | Destabilizing | 0.824 | D | 0.769 | deleterious | None | None | None | None | N |
L/D | 0.9934 | likely_pathogenic | 0.9954 | pathogenic | -3.144 | Highly Destabilizing | 0.555 | D | 0.823 | deleterious | None | None | None | None | N |
L/E | 0.9626 | likely_pathogenic | 0.9727 | pathogenic | -2.845 | Highly Destabilizing | 0.555 | D | 0.797 | deleterious | None | None | None | None | N |
L/F | 0.3348 | likely_benign | 0.4019 | ambiguous | -1.581 | Destabilizing | 0.317 | N | 0.729 | prob.delet. | N | 0.457310992 | None | None | N |
L/G | 0.9424 | likely_pathogenic | 0.9579 | pathogenic | -3.198 | Highly Destabilizing | 0.555 | D | 0.797 | deleterious | None | None | None | None | N |
L/H | 0.9303 | likely_pathogenic | 0.9516 | pathogenic | -2.808 | Highly Destabilizing | 0.915 | D | 0.801 | deleterious | N | 0.513761707 | None | None | N |
L/I | 0.061 | likely_benign | 0.0601 | benign | -0.881 | Destabilizing | None | N | 0.219 | neutral | N | 0.363203178 | None | None | N |
L/K | 0.9638 | likely_pathogenic | 0.9691 | pathogenic | -1.834 | Destabilizing | 0.555 | D | 0.781 | deleterious | None | None | None | None | N |
L/M | 0.1883 | likely_benign | 0.2016 | benign | -0.817 | Destabilizing | 0.38 | N | 0.695 | prob.neutral | None | None | None | None | N |
L/N | 0.9661 | likely_pathogenic | 0.9683 | pathogenic | -2.443 | Highly Destabilizing | 0.791 | D | 0.827 | deleterious | None | None | None | None | N |
L/P | 0.9446 | likely_pathogenic | 0.9739 | pathogenic | -1.45 | Destabilizing | 0.741 | D | 0.823 | deleterious | N | 0.437533152 | None | None | N |
L/Q | 0.9145 | likely_pathogenic | 0.9388 | pathogenic | -2.155 | Highly Destabilizing | 0.791 | D | 0.8 | deleterious | None | None | None | None | N |
L/R | 0.9318 | likely_pathogenic | 0.9531 | pathogenic | -1.806 | Destabilizing | 0.484 | N | 0.805 | deleterious | N | 0.513761707 | None | None | N |
L/S | 0.9062 | likely_pathogenic | 0.9248 | pathogenic | -3.021 | Highly Destabilizing | 0.149 | N | 0.765 | deleterious | None | None | None | None | N |
L/T | 0.645 | likely_pathogenic | 0.6494 | pathogenic | -2.572 | Highly Destabilizing | 0.149 | N | 0.703 | prob.neutral | None | None | None | None | N |
L/V | 0.062 | likely_benign | 0.0717 | benign | -1.45 | Destabilizing | None | N | 0.23 | neutral | N | 0.288121056 | None | None | N |
L/W | 0.852 | likely_pathogenic | 0.9078 | pathogenic | -2.022 | Highly Destabilizing | 0.935 | D | 0.774 | deleterious | None | None | None | None | N |
L/Y | 0.8777 | likely_pathogenic | 0.9046 | pathogenic | -1.75 | Destabilizing | 0.555 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.