Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9229 | 27910;27911;27912 | chr2:178712145;178712144;178712143 | chr2:179576872;179576871;179576870 |
N2AB | 8912 | 26959;26960;26961 | chr2:178712145;178712144;178712143 | chr2:179576872;179576871;179576870 |
N2A | 7985 | 24178;24179;24180 | chr2:178712145;178712144;178712143 | chr2:179576872;179576871;179576870 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 0.124 | N | 0.537 | 0.123 | 0.253205268125 | gnomAD-4.0.0 | 7.20193E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.87501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6641 | likely_pathogenic | 0.694 | pathogenic | -0.622 | Destabilizing | 0.968 | D | 0.627 | neutral | None | None | None | None | N |
A/D | 0.246 | likely_benign | 0.273 | benign | -1.146 | Destabilizing | 0.124 | N | 0.599 | neutral | N | 0.431009825 | None | None | N |
A/E | 0.2663 | likely_benign | 0.2569 | benign | -1.11 | Destabilizing | 0.011 | N | 0.379 | neutral | None | None | None | None | N |
A/F | 0.4292 | ambiguous | 0.4815 | ambiguous | -0.721 | Destabilizing | 0.89 | D | 0.639 | neutral | None | None | None | None | N |
A/G | 0.1349 | likely_benign | 0.1642 | benign | -1.068 | Destabilizing | None | N | 0.25 | neutral | N | 0.450558378 | None | None | N |
A/H | 0.5432 | ambiguous | 0.5631 | ambiguous | -1.171 | Destabilizing | 0.909 | D | 0.632 | neutral | None | None | None | None | N |
A/I | 0.4407 | ambiguous | 0.468 | ambiguous | -0.054 | Destabilizing | 0.726 | D | 0.665 | neutral | None | None | None | None | N |
A/K | 0.5089 | ambiguous | 0.5081 | ambiguous | -1.094 | Destabilizing | 0.157 | N | 0.611 | neutral | None | None | None | None | N |
A/L | 0.2622 | likely_benign | 0.2681 | benign | -0.054 | Destabilizing | 0.272 | N | 0.596 | neutral | None | None | None | None | N |
A/M | 0.3473 | ambiguous | 0.355 | ambiguous | -0.082 | Destabilizing | 0.968 | D | 0.625 | neutral | None | None | None | None | N |
A/N | 0.3306 | likely_benign | 0.3424 | ambiguous | -0.942 | Destabilizing | 0.567 | D | 0.599 | neutral | None | None | None | None | N |
A/P | 0.8962 | likely_pathogenic | 0.9464 | pathogenic | -0.248 | Destabilizing | 0.667 | D | 0.64 | neutral | N | 0.494797817 | None | None | N |
A/Q | 0.347 | ambiguous | 0.3271 | benign | -0.996 | Destabilizing | 0.011 | N | 0.461 | neutral | None | None | None | None | N |
A/R | 0.4251 | ambiguous | 0.4237 | ambiguous | -0.825 | Destabilizing | 0.396 | N | 0.627 | neutral | None | None | None | None | N |
A/S | 0.105 | likely_benign | 0.103 | benign | -1.297 | Destabilizing | 0.124 | N | 0.537 | neutral | N | 0.437895725 | None | None | N |
A/T | 0.1458 | likely_benign | 0.1534 | benign | -1.155 | Destabilizing | 0.22 | N | 0.58 | neutral | N | 0.441205389 | None | None | N |
A/V | 0.2288 | likely_benign | 0.2468 | benign | -0.248 | Destabilizing | 0.364 | N | 0.579 | neutral | N | 0.479033058 | None | None | N |
A/W | 0.7817 | likely_pathogenic | 0.8268 | pathogenic | -1.183 | Destabilizing | 0.968 | D | 0.682 | prob.neutral | None | None | None | None | N |
A/Y | 0.562 | ambiguous | 0.6123 | pathogenic | -0.699 | Destabilizing | 0.89 | D | 0.64 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.