Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9243 | 27952;27953;27954 | chr2:178712103;178712102;178712101 | chr2:179576830;179576829;179576828 |
N2AB | 8926 | 27001;27002;27003 | chr2:178712103;178712102;178712101 | chr2:179576830;179576829;179576828 |
N2A | 7999 | 24220;24221;24222 | chr2:178712103;178712102;178712101 | chr2:179576830;179576829;179576828 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | None | None | 0.979 | D | 0.374 | 0.354 | 0.487912462561 | gnomAD-4.0.0 | 6.84215E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99475E-07 | 0 | 0 |
T/S | None | None | 0.472 | N | 0.297 | 0.085 | 0.190952846119 | gnomAD-4.0.0 | 6.84215E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99475E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1018 | likely_benign | 0.1372 | benign | -0.544 | Destabilizing | 0.309 | N | 0.264 | neutral | N | 0.467679914 | None | None | N |
T/C | 0.5968 | likely_pathogenic | 0.6662 | pathogenic | -0.401 | Destabilizing | 0.996 | D | 0.392 | neutral | None | None | None | None | N |
T/D | 0.5327 | ambiguous | 0.6625 | pathogenic | 0.493 | Stabilizing | 0.854 | D | 0.382 | neutral | None | None | None | None | N |
T/E | 0.3613 | ambiguous | 0.4663 | ambiguous | 0.465 | Stabilizing | 0.742 | D | 0.335 | neutral | None | None | None | None | N |
T/F | 0.3498 | ambiguous | 0.4569 | ambiguous | -0.894 | Destabilizing | 0.91 | D | 0.423 | neutral | None | None | None | None | N |
T/G | 0.3135 | likely_benign | 0.4026 | ambiguous | -0.727 | Destabilizing | 0.004 | N | 0.219 | neutral | None | None | None | None | N |
T/H | 0.3221 | likely_benign | 0.4221 | ambiguous | -0.887 | Destabilizing | 0.984 | D | 0.411 | neutral | None | None | None | None | N |
T/I | 0.2292 | likely_benign | 0.2967 | benign | -0.17 | Destabilizing | 0.521 | D | 0.393 | neutral | N | 0.493405078 | None | None | N |
T/K | 0.2108 | likely_benign | 0.3016 | benign | -0.322 | Destabilizing | 0.521 | D | 0.339 | neutral | N | 0.449054081 | None | None | N |
T/L | 0.1411 | likely_benign | 0.1964 | benign | -0.17 | Destabilizing | 0.17 | N | 0.335 | neutral | None | None | None | None | N |
T/M | 0.1004 | likely_benign | 0.1278 | benign | -0.176 | Destabilizing | 0.206 | N | 0.283 | neutral | None | None | None | None | N |
T/N | 0.169 | likely_benign | 0.2193 | benign | -0.268 | Destabilizing | 0.854 | D | 0.266 | neutral | None | None | None | None | N |
T/P | 0.5671 | likely_pathogenic | 0.7192 | pathogenic | -0.265 | Destabilizing | 0.979 | D | 0.374 | neutral | D | 0.532366111 | None | None | N |
T/Q | 0.2267 | likely_benign | 0.3075 | benign | -0.372 | Destabilizing | 0.91 | D | 0.369 | neutral | None | None | None | None | N |
T/R | 0.1575 | likely_benign | 0.2464 | benign | -0.114 | Destabilizing | 0.003 | N | 0.233 | neutral | N | 0.462908813 | None | None | N |
T/S | 0.1367 | likely_benign | 0.1717 | benign | -0.556 | Destabilizing | 0.472 | N | 0.297 | neutral | N | 0.472968304 | None | None | N |
T/V | 0.1717 | likely_benign | 0.2123 | benign | -0.265 | Destabilizing | 0.59 | D | 0.241 | neutral | None | None | None | None | N |
T/W | 0.6764 | likely_pathogenic | 0.7991 | pathogenic | -0.895 | Destabilizing | 0.996 | D | 0.443 | neutral | None | None | None | None | N |
T/Y | 0.3807 | ambiguous | 0.4954 | ambiguous | -0.607 | Destabilizing | 0.953 | D | 0.421 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.