Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9253 | 27982;27983;27984 | chr2:178712073;178712072;178712071 | chr2:179576800;179576799;179576798 |
N2AB | 8936 | 27031;27032;27033 | chr2:178712073;178712072;178712071 | chr2:179576800;179576799;179576798 |
N2A | 8009 | 24250;24251;24252 | chr2:178712073;178712072;178712071 | chr2:179576800;179576799;179576798 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs1477695783 | -0.791 | 0.002 | N | 0.111 | 0.159 | 0.467501455318 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 1.14758E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
M/I | rs1477695783 | -0.791 | 0.002 | N | 0.111 | 0.159 | 0.467501455318 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/I | rs1477695783 | -0.791 | 0.002 | N | 0.111 | 0.159 | 0.467501455318 | gnomAD-4.0.0 | 2.03E-06 | None | None | None | None | N | None | 3.49638E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/T | None | None | 0.642 | N | 0.429 | 0.413 | 0.786132194152 | gnomAD-4.0.0 | 1.59128E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77269E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.6994 | likely_pathogenic | 0.769 | pathogenic | -2.907 | Highly Destabilizing | 0.495 | N | 0.357 | neutral | None | None | None | None | N |
M/C | 0.9009 | likely_pathogenic | 0.9099 | pathogenic | -1.757 | Destabilizing | 0.981 | D | 0.506 | neutral | None | None | None | None | N |
M/D | 0.9599 | likely_pathogenic | 0.9675 | pathogenic | -1.84 | Destabilizing | 0.981 | D | 0.615 | neutral | None | None | None | None | N |
M/E | 0.7958 | likely_pathogenic | 0.8349 | pathogenic | -1.71 | Destabilizing | 0.936 | D | 0.547 | neutral | None | None | None | None | N |
M/F | 0.4449 | ambiguous | 0.5557 | ambiguous | -1.449 | Destabilizing | 0.704 | D | 0.371 | neutral | None | None | None | None | N |
M/G | 0.8688 | likely_pathogenic | 0.8995 | pathogenic | -3.301 | Highly Destabilizing | 0.936 | D | 0.571 | neutral | None | None | None | None | N |
M/H | 0.8123 | likely_pathogenic | 0.8508 | pathogenic | -2.454 | Highly Destabilizing | 0.995 | D | 0.551 | neutral | None | None | None | None | N |
M/I | 0.3538 | ambiguous | 0.4363 | ambiguous | -1.788 | Destabilizing | 0.002 | N | 0.111 | neutral | N | 0.437394293 | None | None | N |
M/K | 0.4766 | ambiguous | 0.5647 | pathogenic | -1.695 | Destabilizing | 0.784 | D | 0.449 | neutral | N | 0.491265872 | None | None | N |
M/L | 0.1948 | likely_benign | 0.2578 | benign | -1.788 | Destabilizing | 0.001 | N | 0.088 | neutral | N | 0.473355093 | None | None | N |
M/N | 0.7507 | likely_pathogenic | 0.7749 | pathogenic | -1.664 | Destabilizing | 0.981 | D | 0.586 | neutral | None | None | None | None | N |
M/P | 0.9275 | likely_pathogenic | 0.9516 | pathogenic | -2.144 | Highly Destabilizing | 0.981 | D | 0.586 | neutral | None | None | None | None | N |
M/Q | 0.5107 | ambiguous | 0.5362 | ambiguous | -1.602 | Destabilizing | 0.981 | D | 0.457 | neutral | None | None | None | None | N |
M/R | 0.5064 | ambiguous | 0.6313 | pathogenic | -1.306 | Destabilizing | 0.917 | D | 0.55 | neutral | N | 0.484771412 | None | None | N |
M/S | 0.7052 | likely_pathogenic | 0.7518 | pathogenic | -2.284 | Highly Destabilizing | 0.828 | D | 0.427 | neutral | None | None | None | None | N |
M/T | 0.4074 | ambiguous | 0.4167 | ambiguous | -2.052 | Highly Destabilizing | 0.642 | D | 0.429 | neutral | N | 0.471221652 | None | None | N |
M/V | 0.1517 | likely_benign | 0.1901 | benign | -2.144 | Highly Destabilizing | 0.065 | N | 0.28 | neutral | N | 0.443568116 | None | None | N |
M/W | 0.8042 | likely_pathogenic | 0.8912 | pathogenic | -1.485 | Destabilizing | 0.995 | D | 0.493 | neutral | None | None | None | None | N |
M/Y | 0.6963 | likely_pathogenic | 0.7974 | pathogenic | -1.646 | Destabilizing | 0.981 | D | 0.534 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.