Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9254 | 27985;27986;27987 | chr2:178712070;178712069;178712068 | chr2:179576797;179576796;179576795 |
N2AB | 8937 | 27034;27035;27036 | chr2:178712070;178712069;178712068 | chr2:179576797;179576796;179576795 |
N2A | 8010 | 24253;24254;24255 | chr2:178712070;178712069;178712068 | chr2:179576797;179576796;179576795 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/N | rs1191894899 | 0.17 | 0.642 | N | 0.211 | 0.186 | 0.26169431596 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
H/N | rs1191894899 | 0.17 | 0.642 | N | 0.211 | 0.186 | 0.26169431596 | gnomAD-4.0.0 | 3.18256E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86574E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.3096 | likely_benign | 0.3781 | ambiguous | 0.652 | Stabilizing | 0.495 | N | 0.305 | neutral | None | None | None | None | N |
H/C | 0.2291 | likely_benign | 0.2771 | benign | 1.193 | Stabilizing | 0.995 | D | 0.334 | neutral | None | None | None | None | N |
H/D | 0.2883 | likely_benign | 0.3617 | ambiguous | 0.241 | Stabilizing | 0.002 | N | 0.171 | neutral | N | 0.439954595 | None | None | N |
H/E | 0.3332 | likely_benign | 0.3936 | ambiguous | 0.27 | Stabilizing | 0.004 | N | 0.098 | neutral | None | None | None | None | N |
H/F | 0.2201 | likely_benign | 0.2368 | benign | 1.286 | Stabilizing | 0.007 | N | 0.225 | neutral | None | None | None | None | N |
H/G | 0.4243 | ambiguous | 0.5027 | ambiguous | 0.354 | Stabilizing | 0.665 | D | 0.355 | neutral | None | None | None | None | N |
H/I | 0.2093 | likely_benign | 0.2452 | benign | 1.413 | Stabilizing | 0.543 | D | 0.419 | neutral | None | None | None | None | N |
H/K | 0.3579 | ambiguous | 0.4047 | ambiguous | 0.715 | Stabilizing | 0.495 | N | 0.321 | neutral | None | None | None | None | N |
H/L | 0.1128 | likely_benign | 0.1323 | benign | 1.413 | Stabilizing | 0.002 | N | 0.256 | neutral | N | 0.421792909 | None | None | N |
H/M | 0.4195 | ambiguous | 0.4416 | ambiguous | 1.115 | Stabilizing | 0.893 | D | 0.354 | neutral | None | None | None | None | N |
H/N | 0.1077 | likely_benign | 0.1244 | benign | 0.796 | Stabilizing | 0.642 | D | 0.211 | neutral | N | 0.462908813 | None | None | N |
H/P | 0.6322 | likely_pathogenic | 0.7751 | pathogenic | 1.186 | Stabilizing | 0.917 | D | 0.412 | neutral | N | 0.497098744 | None | None | N |
H/Q | 0.1979 | likely_benign | 0.2277 | benign | 0.901 | Stabilizing | 0.642 | D | 0.197 | neutral | N | 0.42692937 | None | None | N |
H/R | 0.1626 | likely_benign | 0.2093 | benign | -0.019 | Destabilizing | 0.642 | D | 0.191 | neutral | N | 0.39658782 | None | None | N |
H/S | 0.2323 | likely_benign | 0.2693 | benign | 0.937 | Stabilizing | 0.495 | N | 0.305 | neutral | None | None | None | None | N |
H/T | 0.247 | likely_benign | 0.291 | benign | 1.066 | Stabilizing | 0.828 | D | 0.393 | neutral | None | None | None | None | N |
H/V | 0.191 | likely_benign | 0.2183 | benign | 1.186 | Stabilizing | 0.329 | N | 0.399 | neutral | None | None | None | None | N |
H/W | 0.3866 | ambiguous | 0.4399 | ambiguous | 1.228 | Stabilizing | 0.995 | D | 0.321 | neutral | None | None | None | None | N |
H/Y | 0.0678 | likely_benign | 0.0766 | benign | 1.555 | Stabilizing | 0.473 | N | 0.233 | neutral | N | 0.4180806 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.