Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9255 | 27988;27989;27990 | chr2:178712067;178712066;178712065 | chr2:179576794;179576793;179576792 |
N2AB | 8938 | 27037;27038;27039 | chr2:178712067;178712066;178712065 | chr2:179576794;179576793;179576792 |
N2A | 8011 | 24256;24257;24258 | chr2:178712067;178712066;178712065 | chr2:179576794;179576793;179576792 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/V | rs2076737035 | None | 0.989 | N | 0.694 | 0.446 | 0.798820475059 | gnomAD-4.0.0 | 2.05263E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69843E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9115 | likely_pathogenic | 0.9505 | pathogenic | -2.099 | Highly Destabilizing | 0.996 | D | 0.736 | prob.delet. | None | None | None | None | N |
F/C | 0.6935 | likely_pathogenic | 0.8127 | pathogenic | -0.997 | Destabilizing | 1.0 | D | 0.807 | deleterious | N | 0.503405418 | None | None | N |
F/D | 0.968 | likely_pathogenic | 0.9795 | pathogenic | -0.738 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
F/E | 0.9691 | likely_pathogenic | 0.9823 | pathogenic | -0.669 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
F/G | 0.9556 | likely_pathogenic | 0.9757 | pathogenic | -2.426 | Highly Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
F/H | 0.8014 | likely_pathogenic | 0.8584 | pathogenic | -0.747 | Destabilizing | 0.999 | D | 0.782 | deleterious | None | None | None | None | N |
F/I | 0.4352 | ambiguous | 0.5457 | ambiguous | -1.131 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | N | 0.487497826 | None | None | N |
F/K | 0.9545 | likely_pathogenic | 0.9685 | pathogenic | -1.136 | Destabilizing | 0.999 | D | 0.824 | deleterious | None | None | None | None | N |
F/L | 0.8886 | likely_pathogenic | 0.9209 | pathogenic | -1.131 | Destabilizing | 0.989 | D | 0.63 | neutral | N | 0.504024716 | None | None | N |
F/M | 0.7364 | likely_pathogenic | 0.7856 | pathogenic | -0.802 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
F/N | 0.8979 | likely_pathogenic | 0.9252 | pathogenic | -1.138 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
F/P | 0.9965 | likely_pathogenic | 0.9976 | pathogenic | -1.445 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
F/Q | 0.9231 | likely_pathogenic | 0.9525 | pathogenic | -1.22 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
F/R | 0.9056 | likely_pathogenic | 0.9338 | pathogenic | -0.479 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
F/S | 0.8058 | likely_pathogenic | 0.8814 | pathogenic | -1.922 | Destabilizing | 0.998 | D | 0.787 | deleterious | N | 0.485457598 | None | None | N |
F/T | 0.8483 | likely_pathogenic | 0.8982 | pathogenic | -1.758 | Destabilizing | 0.999 | D | 0.802 | deleterious | None | None | None | None | N |
F/V | 0.4734 | ambiguous | 0.588 | pathogenic | -1.445 | Destabilizing | 0.989 | D | 0.694 | prob.neutral | N | 0.501117697 | None | None | N |
F/W | 0.7142 | likely_pathogenic | 0.771 | pathogenic | -0.421 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
F/Y | 0.2677 | likely_benign | 0.2885 | benign | -0.61 | Destabilizing | 0.333 | N | 0.331 | neutral | N | 0.484918881 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.