Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9256 | 27991;27992;27993 | chr2:178712064;178712063;178712062 | chr2:179576791;179576790;179576789 |
N2AB | 8939 | 27040;27041;27042 | chr2:178712064;178712063;178712062 | chr2:179576791;179576790;179576789 |
N2A | 8012 | 24259;24260;24261 | chr2:178712064;178712063;178712062 | chr2:179576791;179576790;179576789 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | None | None | 0.001 | N | 0.154 | 0.136 | 0.203808441222 | gnomAD-4.0.0 | 1.59129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85835E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2622 | likely_benign | 0.3787 | ambiguous | 0.245 | Stabilizing | 0.002 | N | 0.201 | neutral | None | None | None | None | N |
R/C | 0.1777 | likely_benign | 0.262 | benign | 0.192 | Stabilizing | 0.497 | N | 0.283 | neutral | None | None | None | None | N |
R/D | 0.5456 | ambiguous | 0.6758 | pathogenic | -0.083 | Destabilizing | 0.018 | N | 0.283 | neutral | None | None | None | None | N |
R/E | 0.2371 | likely_benign | 0.3188 | benign | -0.015 | Destabilizing | 0.009 | N | 0.193 | neutral | None | None | None | None | N |
R/F | 0.458 | ambiguous | 0.5978 | pathogenic | 0.06 | Stabilizing | None | N | 0.202 | neutral | None | None | None | None | N |
R/G | 0.1742 | likely_benign | 0.2814 | benign | 0.049 | Stabilizing | 0.014 | N | 0.225 | neutral | N | 0.515396503 | None | None | N |
R/H | 0.1006 | likely_benign | 0.1247 | benign | -0.619 | Destabilizing | 0.245 | N | 0.211 | neutral | None | None | None | None | N |
R/I | 0.1768 | likely_benign | 0.2407 | benign | 0.728 | Stabilizing | 0.009 | N | 0.291 | neutral | None | None | None | None | N |
R/K | 0.0745 | likely_benign | 0.0882 | benign | 0.239 | Stabilizing | None | N | 0.107 | neutral | N | 0.444995055 | None | None | N |
R/L | 0.1956 | likely_benign | 0.2609 | benign | 0.728 | Stabilizing | 0.004 | N | 0.229 | neutral | None | None | None | None | N |
R/M | 0.1747 | likely_benign | 0.2458 | benign | 0.187 | Stabilizing | 0.196 | N | 0.253 | neutral | N | 0.517994091 | None | None | N |
R/N | 0.4002 | ambiguous | 0.5216 | ambiguous | 0.465 | Stabilizing | 0.018 | N | 0.163 | neutral | None | None | None | None | N |
R/P | 0.761 | likely_pathogenic | 0.8591 | pathogenic | 0.588 | Stabilizing | 0.085 | N | 0.357 | neutral | None | None | None | None | N |
R/Q | 0.0787 | likely_benign | 0.095 | benign | 0.41 | Stabilizing | 0.022 | N | 0.197 | neutral | None | None | None | None | N |
R/S | 0.2695 | likely_benign | 0.397 | ambiguous | 0.258 | Stabilizing | 0.001 | N | 0.154 | neutral | N | 0.45036359 | None | None | N |
R/T | 0.1316 | likely_benign | 0.1785 | benign | 0.454 | Stabilizing | None | N | 0.151 | neutral | N | 0.439954595 | None | None | N |
R/V | 0.2521 | likely_benign | 0.3239 | benign | 0.588 | Stabilizing | None | N | 0.175 | neutral | None | None | None | None | N |
R/W | 0.1396 | likely_benign | 0.2048 | benign | -0.073 | Destabilizing | 0.427 | N | 0.28 | neutral | N | 0.510268726 | None | None | N |
R/Y | 0.3276 | likely_benign | 0.4501 | ambiguous | 0.343 | Stabilizing | None | N | 0.165 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.