Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9257 | 27994;27995;27996 | chr2:178712061;178712060;178712059 | chr2:179576788;179576787;179576786 |
N2AB | 8940 | 27043;27044;27045 | chr2:178712061;178712060;178712059 | chr2:179576788;179576787;179576786 |
N2A | 8013 | 24262;24263;24264 | chr2:178712061;178712060;178712059 | chr2:179576788;179576787;179576786 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1448296665 | None | 0.704 | N | 0.286 | 0.169 | 0.0954503805726 | gnomAD-4.0.0 | 2.73685E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59792E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.5345 | ambiguous | 0.5892 | pathogenic | -0.061 | Destabilizing | 0.17 | N | 0.207 | neutral | None | None | None | None | I |
N/C | 0.6247 | likely_pathogenic | 0.71 | pathogenic | 0.107 | Stabilizing | 0.999 | D | 0.243 | neutral | None | None | None | None | I |
N/D | 0.1347 | likely_benign | 0.146 | benign | 0.278 | Stabilizing | 0.035 | N | 0.129 | neutral | N | 0.437331925 | None | None | I |
N/E | 0.4956 | ambiguous | 0.5111 | ambiguous | 0.233 | Stabilizing | 0.759 | D | 0.225 | neutral | None | None | None | None | I |
N/F | 0.8709 | likely_pathogenic | 0.8792 | pathogenic | -0.639 | Destabilizing | 0.997 | D | 0.241 | neutral | None | None | None | None | I |
N/G | 0.3415 | ambiguous | 0.3911 | ambiguous | -0.173 | Destabilizing | 0.863 | D | 0.274 | neutral | None | None | None | None | I |
N/H | 0.1868 | likely_benign | 0.2189 | benign | -0.126 | Destabilizing | 0.996 | D | 0.221 | neutral | N | 0.455616435 | None | None | I |
N/I | 0.7821 | likely_pathogenic | 0.8156 | pathogenic | 0.134 | Stabilizing | 0.988 | D | 0.277 | neutral | N | 0.465998463 | None | None | I |
N/K | 0.4371 | ambiguous | 0.4617 | ambiguous | 0.178 | Stabilizing | 0.061 | N | 0.096 | neutral | N | 0.488454178 | None | None | I |
N/L | 0.6572 | likely_pathogenic | 0.672 | pathogenic | 0.134 | Stabilizing | 0.939 | D | 0.305 | neutral | None | None | None | None | I |
N/M | 0.6996 | likely_pathogenic | 0.7068 | pathogenic | 0.056 | Stabilizing | 0.999 | D | 0.215 | neutral | None | None | None | None | I |
N/P | 0.9149 | likely_pathogenic | 0.9364 | pathogenic | 0.094 | Stabilizing | 0.991 | D | 0.271 | neutral | None | None | None | None | I |
N/Q | 0.4584 | ambiguous | 0.4751 | ambiguous | -0.227 | Destabilizing | 0.939 | D | 0.239 | neutral | None | None | None | None | I |
N/R | 0.5055 | ambiguous | 0.5317 | ambiguous | 0.241 | Stabilizing | 0.884 | D | 0.185 | neutral | None | None | None | None | I |
N/S | 0.1505 | likely_benign | 0.175 | benign | -0.057 | Destabilizing | 0.704 | D | 0.286 | neutral | N | 0.50078597 | None | None | I |
N/T | 0.4537 | ambiguous | 0.4775 | ambiguous | 0.024 | Stabilizing | 0.92 | D | 0.193 | neutral | N | 0.499113889 | None | None | I |
N/V | 0.7685 | likely_pathogenic | 0.8056 | pathogenic | 0.094 | Stabilizing | 0.939 | D | 0.335 | neutral | None | None | None | None | I |
N/W | 0.8905 | likely_pathogenic | 0.9199 | pathogenic | -0.772 | Destabilizing | 0.999 | D | 0.375 | neutral | None | None | None | None | I |
N/Y | 0.3392 | likely_benign | 0.3702 | ambiguous | -0.429 | Destabilizing | 0.996 | D | 0.223 | neutral | N | 0.469125561 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.