Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9258 | 27997;27998;27999 | chr2:178712058;178712057;178712056 | chr2:179576785;179576784;179576783 |
N2AB | 8941 | 27046;27047;27048 | chr2:178712058;178712057;178712056 | chr2:179576785;179576784;179576783 |
N2A | 8014 | 24265;24266;24267 | chr2:178712058;178712057;178712056 | chr2:179576785;179576784;179576783 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs749135942 | 0.216 | 0.379 | N | 0.271 | 0.123 | 0.165133752707 | gnomAD-2.1.1 | 1.2E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 9.28E-05 | 8.86E-06 | 0 |
N/K | rs749135942 | 0.216 | 0.379 | N | 0.271 | 0.123 | 0.165133752707 | gnomAD-4.0.0 | 2.73685E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 5.6184E-05 | 0 | 0 | 0 | 1.65673E-05 |
N/T | None | None | 0.549 | N | 0.283 | 0.226 | 0.376216005999 | gnomAD-4.0.0 | 1.36843E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79896E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4722 | ambiguous | 0.5419 | ambiguous | -0.823 | Destabilizing | 0.25 | N | 0.416 | neutral | None | None | None | None | N |
N/C | 0.5044 | ambiguous | 0.6388 | pathogenic | -0.018 | Destabilizing | 0.992 | D | 0.513 | neutral | None | None | None | None | N |
N/D | 0.1754 | likely_benign | 0.2232 | benign | -0.265 | Destabilizing | 0.549 | D | 0.266 | neutral | N | 0.489844698 | None | None | N |
N/E | 0.5983 | likely_pathogenic | 0.6375 | pathogenic | -0.137 | Destabilizing | 0.447 | N | 0.245 | neutral | None | None | None | None | N |
N/F | 0.8171 | likely_pathogenic | 0.8453 | pathogenic | -0.57 | Destabilizing | 0.85 | D | 0.509 | neutral | None | None | None | None | N |
N/G | 0.3206 | likely_benign | 0.3831 | ambiguous | -1.177 | Destabilizing | 0.001 | N | 0.129 | neutral | None | None | None | None | N |
N/H | 0.1478 | likely_benign | 0.1896 | benign | -0.743 | Destabilizing | 0.009 | N | 0.17 | neutral | D | 0.534945056 | None | None | N |
N/I | 0.6861 | likely_pathogenic | 0.7605 | pathogenic | 0.088 | Stabilizing | 0.896 | D | 0.514 | neutral | N | 0.515877813 | None | None | N |
N/K | 0.4573 | ambiguous | 0.5091 | ambiguous | -0.058 | Destabilizing | 0.379 | N | 0.271 | neutral | N | 0.517319301 | None | None | N |
N/L | 0.5643 | likely_pathogenic | 0.5912 | pathogenic | 0.088 | Stabilizing | 0.617 | D | 0.478 | neutral | None | None | None | None | N |
N/M | 0.6181 | likely_pathogenic | 0.6621 | pathogenic | 0.312 | Stabilizing | 0.977 | D | 0.469 | neutral | None | None | None | None | N |
N/P | 0.9245 | likely_pathogenic | 0.9412 | pathogenic | -0.186 | Destabilizing | 0.92 | D | 0.467 | neutral | None | None | None | None | N |
N/Q | 0.4436 | ambiguous | 0.4757 | ambiguous | -0.617 | Destabilizing | 0.021 | N | 0.185 | neutral | None | None | None | None | N |
N/R | 0.4565 | ambiguous | 0.5142 | ambiguous | -0.117 | Destabilizing | 0.447 | N | 0.367 | neutral | None | None | None | None | N |
N/S | 0.1106 | likely_benign | 0.1302 | benign | -0.823 | Destabilizing | 0.334 | N | 0.303 | neutral | N | 0.483284085 | None | None | N |
N/T | 0.3205 | likely_benign | 0.3585 | ambiguous | -0.486 | Destabilizing | 0.549 | D | 0.283 | neutral | N | 0.517455373 | None | None | N |
N/V | 0.6856 | likely_pathogenic | 0.7546 | pathogenic | -0.186 | Destabilizing | 0.92 | D | 0.483 | neutral | None | None | None | None | N |
N/W | 0.9062 | likely_pathogenic | 0.9379 | pathogenic | -0.344 | Destabilizing | 0.992 | D | 0.526 | neutral | None | None | None | None | N |
N/Y | 0.324 | likely_benign | 0.3836 | ambiguous | -0.1 | Destabilizing | 0.681 | D | 0.486 | neutral | D | 0.529827238 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.