Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9262 | 28009;28010;28011 | chr2:178712046;178712045;178712044 | chr2:179576773;179576772;179576771 |
N2AB | 8945 | 27058;27059;27060 | chr2:178712046;178712045;178712044 | chr2:179576773;179576772;179576771 |
N2A | 8018 | 24277;24278;24279 | chr2:178712046;178712045;178712044 | chr2:179576773;179576772;179576771 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs897313799 | None | 0.999 | D | 0.655 | 0.596 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/V | rs897313799 | None | 0.999 | D | 0.655 | 0.596 | None | gnomAD-4.0.0 | 6.57125E-06 | None | None | None | None | N | None | 2.41255E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8892 | likely_pathogenic | 0.926 | pathogenic | -2.049 | Highly Destabilizing | 0.999 | D | 0.778 | deleterious | None | None | None | None | N |
L/C | 0.9124 | likely_pathogenic | 0.9417 | pathogenic | -1.353 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
L/D | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -2.898 | Highly Destabilizing | 1.0 | D | 0.937 | deleterious | None | None | None | None | N |
L/E | 0.9971 | likely_pathogenic | 0.9985 | pathogenic | -2.583 | Highly Destabilizing | 1.0 | D | 0.927 | deleterious | None | None | None | None | N |
L/F | 0.6029 | likely_pathogenic | 0.7123 | pathogenic | -1.291 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
L/G | 0.9894 | likely_pathogenic | 0.9938 | pathogenic | -2.62 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
L/H | 0.9891 | likely_pathogenic | 0.9951 | pathogenic | -2.609 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/I | 0.2096 | likely_benign | 0.2226 | benign | -0.334 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
L/K | 0.995 | likely_pathogenic | 0.9973 | pathogenic | -1.525 | Destabilizing | 1.0 | D | 0.924 | deleterious | None | None | None | None | N |
L/M | 0.2693 | likely_benign | 0.3347 | benign | -0.597 | Destabilizing | 1.0 | D | 0.802 | deleterious | D | 0.542943107 | None | None | N |
L/N | 0.9971 | likely_pathogenic | 0.9983 | pathogenic | -2.271 | Highly Destabilizing | 1.0 | D | 0.939 | deleterious | None | None | None | None | N |
L/P | 0.9978 | likely_pathogenic | 0.9988 | pathogenic | -0.897 | Destabilizing | 1.0 | D | 0.939 | deleterious | D | 0.58248298 | None | None | N |
L/Q | 0.9849 | likely_pathogenic | 0.9931 | pathogenic | -1.855 | Destabilizing | 1.0 | D | 0.945 | deleterious | D | 0.58248298 | None | None | N |
L/R | 0.9849 | likely_pathogenic | 0.9927 | pathogenic | -1.873 | Destabilizing | 1.0 | D | 0.941 | deleterious | D | 0.57096209 | None | None | N |
L/S | 0.9896 | likely_pathogenic | 0.995 | pathogenic | -2.717 | Highly Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
L/T | 0.9619 | likely_pathogenic | 0.9762 | pathogenic | -2.234 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
L/V | 0.2311 | likely_benign | 0.2748 | benign | -0.897 | Destabilizing | 0.999 | D | 0.655 | neutral | D | 0.533966658 | None | None | N |
L/W | 0.9614 | likely_pathogenic | 0.9841 | pathogenic | -1.682 | Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
L/Y | 0.9705 | likely_pathogenic | 0.9826 | pathogenic | -1.415 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.