Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9266 | 28021;28022;28023 | chr2:178712034;178712033;178712032 | chr2:179576761;179576760;179576759 |
N2AB | 8949 | 27070;27071;27072 | chr2:178712034;178712033;178712032 | chr2:179576761;179576760;179576759 |
N2A | 8022 | 24289;24290;24291 | chr2:178712034;178712033;178712032 | chr2:179576761;179576760;179576759 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs543197876 | None | 0.996 | N | 0.329 | 0.185 | 0.132336055621 | gnomAD-4.0.0 | 4.78964E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29647E-06 | 0 | 0 |
Q/L | None | None | 0.959 | N | 0.391 | 0.257 | 0.415947407303 | gnomAD-4.0.0 | 1.59135E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02425E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2215 | likely_benign | 0.2447 | benign | -0.2 | Destabilizing | 0.863 | D | 0.36 | neutral | None | None | None | None | N |
Q/C | 0.6394 | likely_pathogenic | 0.6776 | pathogenic | 0.354 | Stabilizing | 0.999 | D | 0.363 | neutral | None | None | None | None | N |
Q/D | 0.2939 | likely_benign | 0.3524 | ambiguous | -0.073 | Destabilizing | 0.969 | D | 0.336 | neutral | None | None | None | None | N |
Q/E | 0.08 | likely_benign | 0.0926 | benign | -0.118 | Destabilizing | 0.826 | D | 0.346 | neutral | N | 0.387135178 | None | None | N |
Q/F | 0.6679 | likely_pathogenic | 0.6843 | pathogenic | -0.496 | Destabilizing | 0.997 | D | 0.355 | neutral | None | None | None | None | N |
Q/G | 0.2584 | likely_benign | 0.3054 | benign | -0.369 | Destabilizing | 0.969 | D | 0.391 | neutral | None | None | None | None | N |
Q/H | 0.1643 | likely_benign | 0.1825 | benign | -0.405 | Destabilizing | 0.996 | D | 0.329 | neutral | N | 0.42946459 | None | None | N |
Q/I | 0.403 | ambiguous | 0.4342 | ambiguous | 0.151 | Stabilizing | 0.997 | D | 0.369 | neutral | None | None | None | None | N |
Q/K | 0.0706 | likely_benign | 0.0749 | benign | 0.198 | Stabilizing | 0.021 | N | 0.149 | neutral | N | 0.365162395 | None | None | N |
Q/L | 0.168 | likely_benign | 0.1888 | benign | 0.151 | Stabilizing | 0.959 | D | 0.391 | neutral | N | 0.482066924 | None | None | N |
Q/M | 0.385 | ambiguous | 0.3937 | ambiguous | 0.573 | Stabilizing | 0.997 | D | 0.335 | neutral | None | None | None | None | N |
Q/N | 0.2398 | likely_benign | 0.251 | benign | -0.04 | Destabilizing | 0.969 | D | 0.328 | neutral | None | None | None | None | N |
Q/P | 0.3445 | ambiguous | 0.4836 | ambiguous | 0.061 | Stabilizing | 0.986 | D | 0.36 | neutral | N | 0.436390562 | None | None | N |
Q/R | 0.0768 | likely_benign | 0.0869 | benign | 0.342 | Stabilizing | 0.704 | D | 0.365 | neutral | N | 0.426346927 | None | None | N |
Q/S | 0.2567 | likely_benign | 0.2649 | benign | -0.054 | Destabilizing | 0.863 | D | 0.335 | neutral | None | None | None | None | N |
Q/T | 0.1812 | likely_benign | 0.1955 | benign | 0.048 | Stabilizing | 0.969 | D | 0.365 | neutral | None | None | None | None | N |
Q/V | 0.2875 | likely_benign | 0.3045 | benign | 0.061 | Stabilizing | 0.969 | D | 0.413 | neutral | None | None | None | None | N |
Q/W | 0.517 | ambiguous | 0.6164 | pathogenic | -0.478 | Destabilizing | 0.999 | D | 0.395 | neutral | None | None | None | None | N |
Q/Y | 0.4176 | ambiguous | 0.449 | ambiguous | -0.206 | Destabilizing | 0.997 | D | 0.331 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.