Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9268 | 28027;28028;28029 | chr2:178712028;178712027;178712026 | chr2:179576755;179576754;179576753 |
N2AB | 8951 | 27076;27077;27078 | chr2:178712028;178712027;178712026 | chr2:179576755;179576754;179576753 |
N2A | 8024 | 24295;24296;24297 | chr2:178712028;178712027;178712026 | chr2:179576755;179576754;179576753 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs751988610 | -0.127 | 0.549 | N | 0.22 | 0.17 | 0.227934060464 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.56E-05 | None | 0 | None | 0 | 0 | 0 |
D/N | rs751988610 | -0.127 | 0.549 | N | 0.22 | 0.17 | 0.227934060464 | gnomAD-4.0.0 | 1.59139E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77254E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.138 | likely_benign | 0.2276 | benign | -0.408 | Destabilizing | 0.016 | N | 0.255 | neutral | N | 0.47987842 | None | None | I |
D/C | 0.5676 | likely_pathogenic | 0.7506 | pathogenic | -0.041 | Destabilizing | 0.992 | D | 0.378 | neutral | None | None | None | None | I |
D/E | 0.1764 | likely_benign | 0.2329 | benign | -0.458 | Destabilizing | 0.712 | D | 0.219 | neutral | N | 0.47976099 | None | None | I |
D/F | 0.5061 | ambiguous | 0.6612 | pathogenic | -0.209 | Destabilizing | 0.972 | D | 0.376 | neutral | None | None | None | None | I |
D/G | 0.1276 | likely_benign | 0.2092 | benign | -0.669 | Destabilizing | 0.002 | N | 0.19 | neutral | N | 0.496637384 | None | None | I |
D/H | 0.2194 | likely_benign | 0.3221 | benign | -0.25 | Destabilizing | 0.99 | D | 0.329 | neutral | N | 0.493751795 | None | None | I |
D/I | 0.3578 | ambiguous | 0.5153 | ambiguous | 0.252 | Stabilizing | 0.85 | D | 0.381 | neutral | None | None | None | None | I |
D/K | 0.3204 | likely_benign | 0.4188 | ambiguous | 0.073 | Stabilizing | 0.617 | D | 0.323 | neutral | None | None | None | None | I |
D/L | 0.3195 | likely_benign | 0.4556 | ambiguous | 0.252 | Stabilizing | 0.617 | D | 0.353 | neutral | None | None | None | None | I |
D/M | 0.5111 | ambiguous | 0.6732 | pathogenic | 0.502 | Stabilizing | 0.992 | D | 0.371 | neutral | None | None | None | None | I |
D/N | 0.074 | likely_benign | 0.0995 | benign | -0.313 | Destabilizing | 0.549 | D | 0.22 | neutral | N | 0.466141119 | None | None | I |
D/P | 0.8169 | likely_pathogenic | 0.9273 | pathogenic | 0.056 | Stabilizing | 0.92 | D | 0.304 | neutral | None | None | None | None | I |
D/Q | 0.286 | likely_benign | 0.3855 | ambiguous | -0.241 | Destabilizing | 0.972 | D | 0.316 | neutral | None | None | None | None | I |
D/R | 0.3311 | likely_benign | 0.4609 | ambiguous | 0.252 | Stabilizing | 0.92 | D | 0.349 | neutral | None | None | None | None | I |
D/S | 0.0983 | likely_benign | 0.1375 | benign | -0.451 | Destabilizing | 0.25 | N | 0.225 | neutral | None | None | None | None | I |
D/T | 0.188 | likely_benign | 0.2903 | benign | -0.245 | Destabilizing | 0.009 | N | 0.213 | neutral | None | None | None | None | I |
D/V | 0.2227 | likely_benign | 0.3294 | benign | 0.056 | Stabilizing | 0.549 | D | 0.335 | neutral | N | 0.495367948 | None | None | I |
D/W | 0.8596 | likely_pathogenic | 0.9341 | pathogenic | -0.043 | Destabilizing | 0.992 | D | 0.447 | neutral | None | None | None | None | I |
D/Y | 0.2225 | likely_benign | 0.333 | benign | 0.032 | Stabilizing | 0.963 | D | 0.375 | neutral | D | 0.526786933 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.