Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9270 | 28033;28034;28035 | chr2:178712022;178712021;178712020 | chr2:179576749;179576748;179576747 |
N2AB | 8953 | 27082;27083;27084 | chr2:178712022;178712021;178712020 | chr2:179576749;179576748;179576747 |
N2A | 8026 | 24301;24302;24303 | chr2:178712022;178712021;178712020 | chr2:179576749;179576748;179576747 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs763189626 | 0.218 | None | N | 0.108 | 0.102 | None | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 1.77E-05 | 0 |
N/S | rs763189626 | 0.218 | None | N | 0.108 | 0.102 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/S | rs763189626 | 0.218 | None | N | 0.108 | 0.102 | None | gnomAD-4.0.0 | 4.08994E-05 | None | None | None | None | I | None | 1.33447E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 5.0857E-05 | 3.29482E-05 | 3.20215E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1269 | likely_benign | 0.1768 | benign | -0.189 | Destabilizing | None | N | 0.126 | neutral | None | None | None | None | I |
N/C | 0.2188 | likely_benign | 0.2998 | benign | 0.333 | Stabilizing | 0.676 | D | 0.268 | neutral | None | None | None | None | I |
N/D | 0.0999 | likely_benign | 0.164 | benign | 0.167 | Stabilizing | None | N | 0.139 | neutral | N | 0.418284804 | None | None | I |
N/E | 0.2312 | likely_benign | 0.3346 | benign | 0.111 | Stabilizing | 0.001 | N | 0.15 | neutral | None | None | None | None | I |
N/F | 0.3117 | likely_benign | 0.3712 | ambiguous | -0.724 | Destabilizing | None | N | 0.179 | neutral | None | None | None | None | I |
N/G | 0.1518 | likely_benign | 0.1838 | benign | -0.31 | Destabilizing | 0.016 | N | 0.166 | neutral | None | None | None | None | I |
N/H | 0.0757 | likely_benign | 0.1032 | benign | -0.357 | Destabilizing | None | N | 0.141 | neutral | N | 0.488243534 | None | None | I |
N/I | 0.1484 | likely_benign | 0.1971 | benign | 0.033 | Stabilizing | 0.055 | N | 0.342 | neutral | N | 0.453730331 | None | None | I |
N/K | 0.162 | likely_benign | 0.2454 | benign | 0.191 | Stabilizing | 0.012 | N | 0.101 | neutral | N | 0.437102638 | None | None | I |
N/L | 0.1524 | likely_benign | 0.1694 | benign | 0.033 | Stabilizing | 0.016 | N | 0.274 | neutral | None | None | None | None | I |
N/M | 0.216 | likely_benign | 0.2515 | benign | 0.284 | Stabilizing | 0.628 | D | 0.27 | neutral | None | None | None | None | I |
N/P | 0.4478 | ambiguous | 0.5572 | ambiguous | -0.017 | Destabilizing | 0.072 | N | 0.325 | neutral | None | None | None | None | I |
N/Q | 0.1929 | likely_benign | 0.2552 | benign | -0.216 | Destabilizing | 0.072 | N | 0.213 | neutral | None | None | None | None | I |
N/R | 0.1743 | likely_benign | 0.2475 | benign | 0.253 | Stabilizing | 0.072 | N | 0.148 | neutral | None | None | None | None | I |
N/S | 0.0616 | likely_benign | 0.0745 | benign | 0.011 | Stabilizing | None | N | 0.108 | neutral | N | 0.370568215 | None | None | I |
N/T | 0.084 | likely_benign | 0.1056 | benign | 0.081 | Stabilizing | 0.012 | N | 0.115 | neutral | N | 0.432966255 | None | None | I |
N/V | 0.1659 | likely_benign | 0.2278 | benign | -0.017 | Destabilizing | 0.072 | N | 0.291 | neutral | None | None | None | None | I |
N/W | 0.5267 | ambiguous | 0.6284 | pathogenic | -0.799 | Destabilizing | 0.864 | D | 0.271 | neutral | None | None | None | None | I |
N/Y | 0.1241 | likely_benign | 0.1491 | benign | -0.492 | Destabilizing | 0.029 | N | 0.363 | neutral | N | 0.499633964 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.