Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9273 | 28042;28043;28044 | chr2:178712013;178712012;178712011 | chr2:179576740;179576739;179576738 |
N2AB | 8956 | 27091;27092;27093 | chr2:178712013;178712012;178712011 | chr2:179576740;179576739;179576738 |
N2A | 8029 | 24310;24311;24312 | chr2:178712013;178712012;178712011 | chr2:179576740;179576739;179576738 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | None | None | 1.0 | D | 0.841 | 0.832 | 0.821358977847 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/R | None | None | 1.0 | D | 0.835 | 0.826 | 0.873837890407 | gnomAD-4.0.0 | 1.59157E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43386E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2405 | likely_benign | 0.3213 | benign | -0.277 | Destabilizing | 1.0 | D | 0.759 | deleterious | D | 0.549395785 | None | None | I |
G/C | 0.6554 | likely_pathogenic | 0.8193 | pathogenic | -0.434 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
G/D | 0.686 | likely_pathogenic | 0.8209 | pathogenic | -0.137 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
G/E | 0.8128 | likely_pathogenic | 0.907 | pathogenic | -0.127 | Destabilizing | 1.0 | D | 0.841 | deleterious | D | 0.640675777 | None | None | I |
G/F | 0.9586 | likely_pathogenic | 0.9818 | pathogenic | -0.519 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
G/H | 0.9193 | likely_pathogenic | 0.9704 | pathogenic | -0.995 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | I |
G/I | 0.9392 | likely_pathogenic | 0.9754 | pathogenic | 0.307 | Stabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
G/K | 0.9204 | likely_pathogenic | 0.9683 | pathogenic | -0.522 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
G/L | 0.9063 | likely_pathogenic | 0.9557 | pathogenic | 0.307 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
G/M | 0.9166 | likely_pathogenic | 0.9654 | pathogenic | 0.149 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
G/N | 0.7971 | likely_pathogenic | 0.8955 | pathogenic | -0.321 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | I |
G/P | 0.9957 | likely_pathogenic | 0.9977 | pathogenic | 0.157 | Stabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
G/Q | 0.8215 | likely_pathogenic | 0.9183 | pathogenic | -0.328 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | I |
G/R | 0.7941 | likely_pathogenic | 0.9112 | pathogenic | -0.518 | Destabilizing | 1.0 | D | 0.835 | deleterious | D | 0.656725498 | None | None | I |
G/S | 0.2027 | likely_benign | 0.3181 | benign | -0.728 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | I |
G/T | 0.6495 | likely_pathogenic | 0.813 | pathogenic | -0.601 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
G/V | 0.8381 | likely_pathogenic | 0.9291 | pathogenic | 0.157 | Stabilizing | 1.0 | D | 0.795 | deleterious | D | 0.640675777 | None | None | I |
G/W | 0.9283 | likely_pathogenic | 0.9731 | pathogenic | -1.01 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
G/Y | 0.9444 | likely_pathogenic | 0.9787 | pathogenic | -0.452 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.