Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9279 | 28060;28061;28062 | chr2:178711995;178711994;178711993 | chr2:179576722;179576721;179576720 |
N2AB | 8962 | 27109;27110;27111 | chr2:178711995;178711994;178711993 | chr2:179576722;179576721;179576720 |
N2A | 8035 | 24328;24329;24330 | chr2:178711995;178711994;178711993 | chr2:179576722;179576721;179576720 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.977 | D | 0.696 | 0.688 | 0.559502987721 | gnomAD-4.0.0 | 1.36967E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80036E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.9141 | likely_pathogenic | 0.9101 | pathogenic | -1.54 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
A/D | 0.9964 | likely_pathogenic | 0.9968 | pathogenic | -2.426 | Highly Destabilizing | 0.999 | D | 0.867 | deleterious | D | 0.65037669 | None | None | N |
A/E | 0.9917 | likely_pathogenic | 0.9916 | pathogenic | -2.251 | Highly Destabilizing | 0.998 | D | 0.844 | deleterious | None | None | None | None | N |
A/F | 0.9578 | likely_pathogenic | 0.966 | pathogenic | -0.829 | Destabilizing | 0.998 | D | 0.887 | deleterious | None | None | None | None | N |
A/G | 0.194 | likely_benign | 0.1918 | benign | -1.768 | Destabilizing | 0.989 | D | 0.626 | neutral | D | 0.59053893 | None | None | N |
A/H | 0.9974 | likely_pathogenic | 0.9978 | pathogenic | -1.97 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
A/I | 0.8183 | likely_pathogenic | 0.8208 | pathogenic | -0.096 | Destabilizing | 0.966 | D | 0.76 | deleterious | None | None | None | None | N |
A/K | 0.9981 | likely_pathogenic | 0.9981 | pathogenic | -1.346 | Destabilizing | 0.998 | D | 0.849 | deleterious | None | None | None | None | N |
A/L | 0.7912 | likely_pathogenic | 0.7661 | pathogenic | -0.096 | Destabilizing | 0.966 | D | 0.698 | prob.neutral | None | None | None | None | N |
A/M | 0.8644 | likely_pathogenic | 0.8694 | pathogenic | -0.471 | Destabilizing | 0.999 | D | 0.882 | deleterious | None | None | None | None | N |
A/N | 0.9922 | likely_pathogenic | 0.9923 | pathogenic | -1.6 | Destabilizing | 0.999 | D | 0.873 | deleterious | None | None | None | None | N |
A/P | 0.9922 | likely_pathogenic | 0.9943 | pathogenic | -0.458 | Destabilizing | 0.999 | D | 0.877 | deleterious | D | 0.634155524 | None | None | N |
A/Q | 0.9894 | likely_pathogenic | 0.9886 | pathogenic | -1.469 | Destabilizing | 0.999 | D | 0.873 | deleterious | None | None | None | None | N |
A/R | 0.9935 | likely_pathogenic | 0.9938 | pathogenic | -1.347 | Destabilizing | 0.998 | D | 0.868 | deleterious | None | None | None | None | N |
A/S | 0.5143 | ambiguous | 0.5047 | ambiguous | -2.049 | Highly Destabilizing | 0.989 | D | 0.633 | neutral | D | 0.612392768 | None | None | N |
A/T | 0.6867 | likely_pathogenic | 0.6736 | pathogenic | -1.749 | Destabilizing | 0.977 | D | 0.696 | prob.neutral | D | 0.608012 | None | None | N |
A/V | 0.528 | ambiguous | 0.5369 | ambiguous | -0.458 | Destabilizing | 0.235 | N | 0.404 | neutral | N | 0.502353277 | None | None | N |
A/W | 0.9975 | likely_pathogenic | 0.9981 | pathogenic | -1.478 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
A/Y | 0.9899 | likely_pathogenic | 0.9922 | pathogenic | -0.983 | Destabilizing | 0.999 | D | 0.892 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.