Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9280 | 28063;28064;28065 | chr2:178711992;178711991;178711990 | chr2:179576719;179576718;179576717 |
N2AB | 8963 | 27112;27113;27114 | chr2:178711992;178711991;178711990 | chr2:179576719;179576718;179576717 |
N2A | 8036 | 24331;24332;24333 | chr2:178711992;178711991;178711990 | chr2:179576719;179576718;179576717 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.999 | N | 0.692 | 0.597 | 0.57347888143 | gnomAD-4.0.0 | 1.59669E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87061E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1786 | likely_benign | 0.2487 | benign | -0.659 | Destabilizing | 0.989 | D | 0.623 | neutral | D | 0.527152292 | None | None | I |
E/C | 0.8798 | likely_pathogenic | 0.9121 | pathogenic | -0.22 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | I |
E/D | 0.2454 | likely_benign | 0.2847 | benign | -1.087 | Destabilizing | 0.998 | D | 0.548 | neutral | D | 0.532694185 | None | None | I |
E/F | 0.7571 | likely_pathogenic | 0.7919 | pathogenic | -0.695 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | I |
E/G | 0.1943 | likely_benign | 0.3021 | benign | -0.953 | Destabilizing | 0.999 | D | 0.692 | prob.neutral | N | 0.488658979 | None | None | I |
E/H | 0.5093 | ambiguous | 0.5839 | pathogenic | -1.011 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
E/I | 0.3731 | ambiguous | 0.4587 | ambiguous | 0.115 | Stabilizing | 0.995 | D | 0.714 | prob.delet. | None | None | None | None | I |
E/K | 0.1296 | likely_benign | 0.1895 | benign | -0.29 | Destabilizing | 0.998 | D | 0.675 | neutral | N | 0.504486076 | None | None | I |
E/L | 0.5001 | ambiguous | 0.6107 | pathogenic | 0.115 | Stabilizing | 0.983 | D | 0.717 | prob.delet. | None | None | None | None | I |
E/M | 0.4875 | ambiguous | 0.5722 | pathogenic | 0.56 | Stabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
E/N | 0.3334 | likely_benign | 0.4103 | ambiguous | -0.566 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
E/P | 0.9816 | likely_pathogenic | 0.9915 | pathogenic | -0.122 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
E/Q | 0.1226 | likely_benign | 0.1557 | benign | -0.522 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | N | 0.50173656 | None | None | I |
E/R | 0.2341 | likely_benign | 0.3125 | benign | -0.244 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
E/S | 0.2108 | likely_benign | 0.2627 | benign | -0.844 | Destabilizing | 0.996 | D | 0.71 | prob.delet. | None | None | None | None | I |
E/T | 0.228 | likely_benign | 0.2828 | benign | -0.605 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | I |
E/V | 0.2144 | likely_benign | 0.2646 | benign | -0.122 | Destabilizing | 0.733 | D | 0.487 | neutral | N | 0.515820578 | None | None | I |
E/W | 0.8991 | likely_pathogenic | 0.9333 | pathogenic | -0.62 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
E/Y | 0.7019 | likely_pathogenic | 0.7701 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.