Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9282 | 28069;28070;28071 | chr2:178711986;178711985;178711984 | chr2:179576713;179576712;179576711 |
N2AB | 8965 | 27118;27119;27120 | chr2:178711986;178711985;178711984 | chr2:179576713;179576712;179576711 |
N2A | 8038 | 24337;24338;24339 | chr2:178711986;178711985;178711984 | chr2:179576713;179576712;179576711 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs771474147 | 0.104 | 0.014 | N | 0.225 | 0.277 | 0.126345400529 | gnomAD-2.1.1 | 1.62E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.58E-05 | 0 |
S/R | rs771474147 | 0.104 | 0.014 | N | 0.225 | 0.277 | 0.126345400529 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
S/R | rs771474147 | 0.104 | 0.014 | N | 0.225 | 0.277 | 0.126345400529 | gnomAD-4.0.0 | 7.72758E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.44615E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0881 | likely_benign | 0.0873 | benign | -0.163 | Destabilizing | 0.176 | N | 0.185 | neutral | None | None | None | None | I |
S/C | 0.1981 | likely_benign | 0.2041 | benign | -0.448 | Destabilizing | 0.013 | N | 0.234 | neutral | N | 0.51055235 | None | None | I |
S/D | 0.2914 | likely_benign | 0.3155 | benign | -0.001 | Destabilizing | 0.543 | D | 0.177 | neutral | None | None | None | None | I |
S/E | 0.4356 | ambiguous | 0.4505 | ambiguous | -0.108 | Destabilizing | 0.031 | N | 0.147 | neutral | None | None | None | None | I |
S/F | 0.2781 | likely_benign | 0.256 | benign | -0.881 | Destabilizing | 0.893 | D | 0.271 | neutral | None | None | None | None | I |
S/G | 0.0916 | likely_benign | 0.1057 | benign | -0.215 | Destabilizing | 0.425 | N | 0.175 | neutral | N | 0.477054333 | None | None | I |
S/H | 0.2938 | likely_benign | 0.3265 | benign | -0.556 | Destabilizing | 0.944 | D | 0.244 | neutral | None | None | None | None | I |
S/I | 0.1294 | likely_benign | 0.1423 | benign | -0.163 | Destabilizing | 0.473 | N | 0.289 | neutral | D | 0.538718867 | None | None | I |
S/K | 0.4898 | ambiguous | 0.5246 | ambiguous | -0.458 | Destabilizing | 0.031 | N | 0.139 | neutral | None | None | None | None | I |
S/L | 0.1219 | likely_benign | 0.1088 | benign | -0.163 | Destabilizing | 0.007 | N | 0.164 | neutral | None | None | None | None | I |
S/M | 0.1929 | likely_benign | 0.1932 | benign | -0.16 | Destabilizing | 0.893 | D | 0.239 | neutral | None | None | None | None | I |
S/N | 0.0972 | likely_benign | 0.1125 | benign | -0.26 | Destabilizing | 0.642 | D | 0.231 | neutral | N | 0.509916113 | None | None | I |
S/P | 0.3499 | ambiguous | 0.2743 | benign | -0.138 | Destabilizing | 0.828 | D | 0.256 | neutral | None | None | None | None | I |
S/Q | 0.4219 | ambiguous | 0.4518 | ambiguous | -0.48 | Destabilizing | 0.085 | N | 0.237 | neutral | None | None | None | None | I |
S/R | 0.3744 | ambiguous | 0.4309 | ambiguous | -0.202 | Destabilizing | 0.014 | N | 0.225 | neutral | N | 0.514783215 | None | None | I |
S/T | 0.0846 | likely_benign | 0.0821 | benign | -0.355 | Destabilizing | 0.023 | N | 0.16 | neutral | D | 0.530214027 | None | None | I |
S/V | 0.1688 | likely_benign | 0.1731 | benign | -0.138 | Destabilizing | 0.329 | N | 0.263 | neutral | None | None | None | None | I |
S/W | 0.4479 | ambiguous | 0.4673 | ambiguous | -0.965 | Destabilizing | 0.995 | D | 0.234 | neutral | None | None | None | None | I |
S/Y | 0.2355 | likely_benign | 0.2344 | benign | -0.652 | Destabilizing | 0.981 | D | 0.267 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.