Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC928528078;28079;28080 chr2:178711977;178711976;178711975chr2:179576704;179576703;179576702
N2AB896827127;27128;27129 chr2:178711977;178711976;178711975chr2:179576704;179576703;179576702
N2A804124346;24347;24348 chr2:178711977;178711976;178711975chr2:179576704;179576703;179576702
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: E
  • RefSeq wild type transcript codon: GAA
  • RefSeq wild type template codon: CTT
  • Domain: Ig-78
  • Domain position: 81
  • Structural Position: 165
  • Q(SASA): 0.5286
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
E/A rs1560573999 None 0.007 N 0.225 0.248 0.297718772494 gnomAD-2.1.1 3.18E-05 None None None None I None 0 0 None 0 0 None 0 None 0 6.48E-05 0
E/A rs1560573999 None 0.007 N 0.225 0.248 0.297718772494 gnomAD-3.1.2 6.57E-06 None None None None I None 0 0 0 0 0 None 0 0 1.47E-05 0 0
E/A rs1560573999 None 0.007 N 0.225 0.248 0.297718772494 gnomAD-4.0.0 6.5722E-06 None None None None I None 0 0 None 0 0 None 0 0 1.4699E-05 0 0
E/K None None 0.549 N 0.391 0.215 0.283761946502 gnomAD-4.0.0 1.60823E-06 None None None None I None 0 0 None 0 0 None 0 0 2.8929E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
E/A 0.1243 likely_benign 0.1379 benign -0.482 Destabilizing 0.007 N 0.225 neutral N 0.465509187 None None I
E/C 0.7928 likely_pathogenic 0.8015 pathogenic -0.171 Destabilizing 0.992 D 0.559 neutral None None None None I
E/D 0.1676 likely_benign 0.1735 benign -0.444 Destabilizing 0.004 N 0.141 neutral N 0.484076306 None None I
E/F 0.6321 likely_pathogenic 0.6413 pathogenic -0.245 Destabilizing 0.972 D 0.562 neutral None None None None I
E/G 0.1747 likely_benign 0.2094 benign -0.7 Destabilizing 0.334 N 0.548 neutral D 0.53631328 None None I
E/H 0.3874 ambiguous 0.4226 ambiguous -0.007 Destabilizing 0.972 D 0.469 neutral None None None None I
E/I 0.3024 likely_benign 0.3363 benign 0.065 Stabilizing 0.92 D 0.562 neutral None None None None I
E/K 0.114 likely_benign 0.1488 benign 0.233 Stabilizing 0.549 D 0.391 neutral N 0.452057101 None None I
E/L 0.378 ambiguous 0.4208 ambiguous 0.065 Stabilizing 0.617 D 0.575 neutral None None None None I
E/M 0.351 ambiguous 0.383 ambiguous 0.15 Stabilizing 0.992 D 0.547 neutral None None None None I
E/N 0.234 likely_benign 0.2545 benign -0.167 Destabilizing 0.447 N 0.397 neutral None None None None I
E/P 0.8838 likely_pathogenic 0.8967 pathogenic -0.097 Destabilizing 0.92 D 0.489 neutral None None None None I
E/Q 0.1146 likely_benign 0.1282 benign -0.128 Destabilizing 0.549 D 0.463 neutral N 0.485652386 None None I
E/R 0.2113 likely_benign 0.2537 benign 0.498 Stabilizing 0.92 D 0.435 neutral None None None None I
E/S 0.152 likely_benign 0.1548 benign -0.336 Destabilizing 0.026 N 0.133 neutral None None None None I
E/T 0.1607 likely_benign 0.1681 benign -0.155 Destabilizing 0.447 N 0.473 neutral None None None None I
E/V 0.1802 likely_benign 0.1977 benign -0.097 Destabilizing 0.549 D 0.565 neutral N 0.50102727 None None I
E/W 0.8559 likely_pathogenic 0.8783 pathogenic -0.041 Destabilizing 0.992 D 0.621 neutral None None None None I
E/Y 0.545 ambiguous 0.5738 pathogenic 0.013 Stabilizing 0.972 D 0.557 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.