Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9288 | 28087;28088;28089 | chr2:178711968;178711967;178711966 | chr2:179576695;179576694;179576693 |
N2AB | 8971 | 27136;27137;27138 | chr2:178711968;178711967;178711966 | chr2:179576695;179576694;179576693 |
N2A | 8044 | 24355;24356;24357 | chr2:178711968;178711967;178711966 | chr2:179576695;179576694;179576693 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 0.055 | N | 0.709 | 0.244 | 0.236890367714 | gnomAD-4.0.0 | 1.61923E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.06673E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.2424 | likely_benign | 0.2804 | benign | -0.588 | Destabilizing | None | N | 0.313 | neutral | None | None | None | None | N |
A/D | 0.2801 | likely_benign | 0.3262 | benign | -0.353 | Destabilizing | 0.038 | N | 0.681 | prob.neutral | None | None | None | None | N |
A/E | 0.3041 | likely_benign | 0.3336 | benign | -0.341 | Destabilizing | 0.029 | N | 0.672 | neutral | N | 0.521189112 | None | None | N |
A/F | 0.241 | likely_benign | 0.3172 | benign | -0.596 | Destabilizing | 0.356 | N | 0.725 | prob.delet. | None | None | None | None | N |
A/G | 0.1281 | likely_benign | 0.1474 | benign | -0.891 | Destabilizing | 0.012 | N | 0.443 | neutral | N | 0.50102727 | None | None | N |
A/H | 0.42 | ambiguous | 0.4874 | ambiguous | -0.973 | Destabilizing | 0.356 | N | 0.701 | prob.neutral | None | None | None | None | N |
A/I | 0.1916 | likely_benign | 0.241 | benign | 0.068 | Stabilizing | 0.072 | N | 0.699 | prob.neutral | None | None | None | None | N |
A/K | 0.4851 | ambiguous | 0.5623 | ambiguous | -0.713 | Destabilizing | 0.038 | N | 0.669 | neutral | None | None | None | None | N |
A/L | 0.1568 | likely_benign | 0.201 | benign | 0.068 | Stabilizing | 0.016 | N | 0.659 | neutral | None | None | None | None | N |
A/M | 0.2044 | likely_benign | 0.2373 | benign | -0.058 | Destabilizing | 0.628 | D | 0.705 | prob.neutral | None | None | None | None | N |
A/N | 0.2171 | likely_benign | 0.2565 | benign | -0.5 | Destabilizing | 0.038 | N | 0.688 | prob.neutral | None | None | None | None | N |
A/P | 0.7669 | likely_pathogenic | 0.8949 | pathogenic | -0.109 | Destabilizing | 0.055 | N | 0.709 | prob.delet. | N | 0.507639061 | None | None | N |
A/Q | 0.3826 | ambiguous | 0.4184 | ambiguous | -0.543 | Destabilizing | 0.072 | N | 0.731 | prob.delet. | None | None | None | None | N |
A/R | 0.4413 | ambiguous | 0.5208 | ambiguous | -0.548 | Destabilizing | 0.072 | N | 0.711 | prob.delet. | None | None | None | None | N |
A/S | 0.0669 | likely_benign | 0.0736 | benign | -0.958 | Destabilizing | None | N | 0.166 | neutral | N | 0.400900349 | None | None | N |
A/T | 0.0684 | likely_benign | 0.0699 | benign | -0.825 | Destabilizing | 0.012 | N | 0.521 | neutral | N | 0.435359639 | None | None | N |
A/V | 0.1124 | likely_benign | 0.1318 | benign | -0.109 | Destabilizing | 0.024 | N | 0.561 | neutral | N | 0.494061226 | None | None | N |
A/W | 0.6174 | likely_pathogenic | 0.728 | pathogenic | -0.982 | Destabilizing | 0.864 | D | 0.72 | prob.delet. | None | None | None | None | N |
A/Y | 0.3224 | likely_benign | 0.4228 | ambiguous | -0.505 | Destabilizing | 0.356 | N | 0.727 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.