Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9289 | 28090;28091;28092 | chr2:178711965;178711964;178711963 | chr2:179576692;179576691;179576690 |
N2AB | 8972 | 27139;27140;27141 | chr2:178711965;178711964;178711963 | chr2:179576692;179576691;179576690 |
N2A | 8045 | 24358;24359;24360 | chr2:178711965;178711964;178711963 | chr2:179576692;179576691;179576690 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs2076724301 | None | 0.004 | N | 0.279 | 0.327 | 0.273938319068 | gnomAD-4.0.0 | 8.09961E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.39098E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0772 | likely_benign | 0.0884 | benign | -0.459 | Destabilizing | 0.002 | N | 0.178 | neutral | D | 0.532443469 | None | None | I |
S/C | 0.1608 | likely_benign | 0.1779 | benign | -0.333 | Destabilizing | 0.977 | D | 0.561 | neutral | None | None | None | None | I |
S/D | 0.4199 | ambiguous | 0.4312 | ambiguous | 0.409 | Stabilizing | 0.766 | D | 0.502 | neutral | None | None | None | None | I |
S/E | 0.473 | ambiguous | 0.4866 | ambiguous | 0.346 | Stabilizing | 0.617 | D | 0.481 | neutral | None | None | None | None | I |
S/F | 0.2072 | likely_benign | 0.2598 | benign | -0.864 | Destabilizing | 0.92 | D | 0.655 | neutral | None | None | None | None | I |
S/G | 0.105 | likely_benign | 0.1318 | benign | -0.624 | Destabilizing | 0.25 | N | 0.47 | neutral | None | None | None | None | I |
S/H | 0.2904 | likely_benign | 0.2776 | benign | -1.067 | Destabilizing | 0.992 | D | 0.567 | neutral | None | None | None | None | I |
S/I | 0.2044 | likely_benign | 0.2421 | benign | -0.147 | Destabilizing | 0.85 | D | 0.671 | neutral | None | None | None | None | I |
S/K | 0.3994 | ambiguous | 0.3666 | ambiguous | -0.447 | Destabilizing | 0.617 | D | 0.471 | neutral | None | None | None | None | I |
S/L | 0.1207 | likely_benign | 0.151 | benign | -0.147 | Destabilizing | 0.379 | N | 0.64 | neutral | N | 0.498622932 | None | None | I |
S/M | 0.242 | likely_benign | 0.2612 | benign | -0.005 | Destabilizing | 0.992 | D | 0.575 | neutral | None | None | None | None | I |
S/N | 0.1374 | likely_benign | 0.1448 | benign | -0.214 | Destabilizing | 0.766 | D | 0.527 | neutral | None | None | None | None | I |
S/P | 0.2865 | likely_benign | 0.3897 | ambiguous | -0.22 | Destabilizing | 0.004 | N | 0.279 | neutral | N | 0.500028511 | None | None | I |
S/Q | 0.3975 | ambiguous | 0.3807 | ambiguous | -0.407 | Destabilizing | 0.92 | D | 0.537 | neutral | None | None | None | None | I |
S/R | 0.3271 | likely_benign | 0.331 | benign | -0.302 | Destabilizing | 0.85 | D | 0.601 | neutral | None | None | None | None | I |
S/T | 0.0867 | likely_benign | 0.0953 | benign | -0.337 | Destabilizing | 0.334 | N | 0.473 | neutral | N | 0.46289017 | None | None | I |
S/V | 0.183 | likely_benign | 0.2177 | benign | -0.22 | Destabilizing | 0.447 | N | 0.631 | neutral | None | None | None | None | I |
S/W | 0.3773 | ambiguous | 0.4659 | ambiguous | -0.841 | Destabilizing | 0.992 | D | 0.692 | prob.neutral | None | None | None | None | I |
S/Y | 0.1923 | likely_benign | 0.2321 | benign | -0.569 | Destabilizing | 0.972 | D | 0.649 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.